Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2870 |
Symbol | |
ID | 5754648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3419965 |
End bp | 3423207 |
Gene Length | 3243 bp |
Protein Length | 1080 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641289181 |
Product | acriflavin resistance protein |
Protein accession | YP_001555296 |
Protein GI | 160875980 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.222771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACATG CTCCAGTACC ACAGACCACA CTTGGGATTT CCGGTCGAAT TGCCGCCGCC TTCCAAAATA GCGCCATCAC GCCGCTATTA GCGCTTCTCG GACTCTTACT TGGCTTATTC GCTATTTTGG TGACGCCAAA GGAAGAAGAG CCACAGATTG ATGTCACCTT TGCCGACGTG TTTATTCCTT TTCCCGGCGC GACACCTACC GAAGTTGAAA ACTTAGTCAC CTTGCCAGCG GAACAAGTGA TCTCCGAAAT CAAAGGCATA GATACTCTGT ACTCGTTCTC CCAACCCGAT GGCGCGCTGA TTATCGTCAT CTTTAAGGTC GGCATCGCGC GCAATGATGC CATCGTCAGC CTGTACAACC AGATTTATTC CAATATGGAT AAATTGCCAA GAGGCGCAGG GGTGGGCGAT CCGCTAATTA AACCCCGCGG CATCGATGAT GTGCCCATTG TCAGTTTGAC CTTGTGGTCA AAGGATAGAC AAGTCTCTGC CGAGCAACTG ACCCATGTCG CCCTTGGATT AGAAACCGAA ATTAAGCGCA TTCCCGGTAC CCGCGAAATC TATACCGTTG GCCAGCACGA CATGGTGGCC AACATACGTA TCGATCCCGC CAAGATGAAC AGCTTTAATC TGACCTACGA CAAATTAAGA CAGAGTCTAA ATGACAATAA TATGGTCTCT ATGCCTGCAT CCTTAGTGCA AGGTAATCAA GAGATTAAAG TTCAGGCTGG GCAATTTTTA CAATCCATAG ACGATCTCAA ACAATTAGTT GTCAGTGTCT ATCAAGATAA ACAAGGCAAG CATATTCCGA TTTATTTGGC GGATATTGCC GAAATCAGCT TAAAAAGTGA TATCCCTAAG CAGAGTGTTT GGCACGCGGA TAAAACCGAC ATTTATCCCG CCGTCACTAT CGCAATTGGT AAACAAGCGG GACAAAATGC CGTCGATATC GCCGACAGTG TGATTGAGCG GATTGCTAAG GTCGACAATG TATTGATCCC CGCGAATGTC GAAGTCACAG TGTCACGTAA CTATGGCGAA ACCGCGGCGG ATAAATCTAA CACCCTTATT TTAAAACTGA TTTTTGCCAC CAGCGCCGTA GTCGTACTGG TCTTTTTAAC CATGGGCGCA CGCGAATCCT TAGTCGTAGG TGTGGCCATT ATTATCACGC TGGCGATCAC CCTTTTCGCC TCTTGGGCGT GGGGATTTAC CCTAAACCGC GTGTCCTTGT TCGCCTTGAT TTTCTCTATC GGCATCTTGG TCGACGATGC CATAGTCGTG GTTGAAAACA TCCATCGGCA CATGGCGCTC GGCAAAAAGT CCTTTAGTGA GCTTATCCCT GTGGCGGTCG ATGAAGTCGG TGGCCCGACG ATTCTGGCGA CGTTCACTGT TATCGCGGCA CTGCTGCCGA TGGCTTTTGT ATCGGGCTTA ATGGGGCCTT ACATGAGTCC GATCCCCATC AACGCCAGTA TGGGCATGTT GATTTCTCTA GTGGTTGCCT TTGTCGTCAC CCCTTGGCTC AGTCGTAAAC TGCTGAAACA CAATGACAAG CACGATAGTG CCCAAGCCTC ACACGAGGAT GAAGCCGAAA CTAAGATGGT GCGCCTCTTC ACCCACTTAA TTGGTCCTTT CCTGCTGGGT AAAAATGCCC GTAAGGCAAG AATGGGACTG GCTGCCGGGG TATTTGTGTT AATTGGCATC GCCGTCGCGC TCCCCCTGGG TCAGCTTGTA GTGCTAAAAA TGCTGCCCTT CGATAACAAG TCCGAGTTTC AAGTGATGGT AGACATGCCC GAAGGCACTC CCGTAGAGCA AACCCAGAGA GTGCTACAGG ATTTGAGTCG CTATCTGACG ACTGTCCCTG AAGTCGAGCA TCTGCAGTTG TATGCGGGCA CTAACGCGCC AATGAACTTT AACGGCTTAG TGCGTCACTA CTTCCTGCGT CACAGCCAAG AGCTTGGCGA CATTCAAGTG AACCTAGTCG ATAAAAAACA CCGCAAACGC GACAGCCACA CCATAGCGGT ATCGGTGCGA GACGAACTGC AGCAAATTGG CGAGCAATAT CAAGCCAATA TCAAAGTCGT TGAAGTGCCA CCTGGACCGC CAGTGTGGTC GCCGCTGGTT GCCGAAGTGT ATGGCCCAAG CCCCGCAATC CGCGAGCAAG CCGCTTACGA GATGCAGGCG CTGTTCCATG AAACCAAAGA TGTGGTCGAT ATCGATATTT TCTTGCCCGC TGCCCAGCAA AAATGGCAGG TGATGATCGA CCGCAGTAAA GCCAGCCTGA TGGCCGTGCC CTACAGCAAT ATTGTCGACT TGATTGCCAC CTCCGTTGGC GGCAAAGATG TGAGTTATTT ACATCAAGCC CAGCAAAAAC AACCGATACC GATCCGCCTG CAATTAAACG AAGGCGCGAA AGTCGATTTA GAGCAAGTGC TGAATATGAA GTTACTGAGC CAAACGGGGC AATCCGTGCC TGTGTCTGAG CTAGTTACCA TCAAACGCGG CAAAATCGAT GCACCGATTA TCCATAAGAA TATGATCCCT ATGATCATGG TCGTCGCCGA TATGTCGGGG CCACTGGACA GCCCACTCTA CGGCATGTTC GACATGGCGG GCAAAATTGA TGGCGCCGAT GGCTTAGGGT TTGATCAGCA TTATATTCAC CAACCCACAG GGCTAGACTC GGTCGCCGTG CTGTGGGATG GCGAGTGGAA AATCACCTAC GAAACCTTTA GAGACATGGG CATCGCCTAT GCGGTCGGCA TGATCGCCAT TTATCTCTTG GTAGTGGCGC AGTTTAGATC GTATCTCGTG CCGCTCATCA TCATGGCGCC AATCCCATTA ACTGTGATTG GTGTAATGCC AGGCCATGCC CTGCTCGGAG CGCAATTCAC CGCGACGTCC ATGATAGGCA TGATAGCGCT GGCGGGGATT ATTGTGCGTA ACTCGATATT ATTGGTCGAT TTTATCAATC AAGAAACTGC ATCCGGCGTG CCCTTTGAGC GGGCAGTGAT CCACTCGGGT GCCGTGCGAG CTAAACCCAT TATGCTCACC GCATTAGCGG CCATGATAGG GGCGCTGTTT ATCCTTGATG ATCCGATTTT CAATGGCTTA GCGATCAGTC TGATCTTTGG TATTTTTATC TCGACCATAC TGACCTTAGT TGTCATCCCA GTGCTGTACT ACACAGCAAT GAAAAACCGC ATGAATACTG TTCAGATACA GACACAAAAC TAA
|
Protein sequence | MKHAPVPQTT LGISGRIAAA FQNSAITPLL ALLGLLLGLF AILVTPKEEE PQIDVTFADV FIPFPGATPT EVENLVTLPA EQVISEIKGI DTLYSFSQPD GALIIVIFKV GIARNDAIVS LYNQIYSNMD KLPRGAGVGD PLIKPRGIDD VPIVSLTLWS KDRQVSAEQL THVALGLETE IKRIPGTREI YTVGQHDMVA NIRIDPAKMN SFNLTYDKLR QSLNDNNMVS MPASLVQGNQ EIKVQAGQFL QSIDDLKQLV VSVYQDKQGK HIPIYLADIA EISLKSDIPK QSVWHADKTD IYPAVTIAIG KQAGQNAVDI ADSVIERIAK VDNVLIPANV EVTVSRNYGE TAADKSNTLI LKLIFATSAV VVLVFLTMGA RESLVVGVAI IITLAITLFA SWAWGFTLNR VSLFALIFSI GILVDDAIVV VENIHRHMAL GKKSFSELIP VAVDEVGGPT ILATFTVIAA LLPMAFVSGL MGPYMSPIPI NASMGMLISL VVAFVVTPWL SRKLLKHNDK HDSAQASHED EAETKMVRLF THLIGPFLLG KNARKARMGL AAGVFVLIGI AVALPLGQLV VLKMLPFDNK SEFQVMVDMP EGTPVEQTQR VLQDLSRYLT TVPEVEHLQL YAGTNAPMNF NGLVRHYFLR HSQELGDIQV NLVDKKHRKR DSHTIAVSVR DELQQIGEQY QANIKVVEVP PGPPVWSPLV AEVYGPSPAI REQAAYEMQA LFHETKDVVD IDIFLPAAQQ KWQVMIDRSK ASLMAVPYSN IVDLIATSVG GKDVSYLHQA QQKQPIPIRL QLNEGAKVDL EQVLNMKLLS QTGQSVPVSE LVTIKRGKID APIIHKNMIP MIMVVADMSG PLDSPLYGMF DMAGKIDGAD GLGFDQHYIH QPTGLDSVAV LWDGEWKITY ETFRDMGIAY AVGMIAIYLL VVAQFRSYLV PLIIMAPIPL TVIGVMPGHA LLGAQFTATS MIGMIALAGI IVRNSILLVD FINQETASGV PFERAVIHSG AVRAKPIMLT ALAAMIGALF ILDDPIFNGL AISLIFGIFI STILTLVVIP VLYYTAMKNR MNTVQIQTQN
|
| |