| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2869 |
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| Symbol | |
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| ID | 5754647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3418915 |
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| End bp | 3419928 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641289180 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001555295 |
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| Protein GI | 160875979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000418866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.697235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAA TTTCTCGCGC ATTTTTCTTA CTCTTGGCAC TTGCCAGTAC TCAAGTCCAG
GCTGCCTCAG TCGAAACCAT CGAAGTCTTA ACTAAACCCT ACGCTAATTG GGTCACCTTA
GATGCCACCA TAGAAGCAGT AAAAGCGGCG ACTGTGTCAG CGCAAACCTC TGGCCGTATC
GTCAAACTCA ACTACGATGT TAATGATGTT GTCCCCGAGG GAGCCGCCCT ACTGGAGATA
ACCAGTAAAG AACAAGGCGC TGAACTCGCA AGCTTTGAGG CCGATTTAGC CAAAGCCAAA
GCCTTGAATG TGGAAGCACA GGCGCAATAC AAACGTTATA AAGAGTTATT CCCCCAAGGC
GCGATTTCTA AGGGCGCAAT GGATGAAGCC ACCGCCAATG CTAAGGCCAC AGAGCAAGCC
GTAACCGCAG CGCAAGCCCG CGTCATCAAA GCCAGCGAAT CCTTAAAATA CACTGTGGTA
TCAGCACCTT TTAGTGGTGT AGTCACAGAG CGTTTTGTCG AACTGGGCGA AACCGTGAGC
CCAGGACAAG CACTACTTTC AGGGTTTTCC GCGAGTCAAA TGCGCGCCAT TACCCAAGTG
CCGCAGCGCT ATATCAACCA GCTGAAAATC GCTCCCGAAT TCCTCGTCCG TTTAAGTGAT
GGCCGCGAGT TAACCTCAAA GGATCTCACT ATTTTTAGTT TTGCCGATCC CGTCAGCCAC
AGTTACCAAG TGCGCATTAA TCTGCCTGAA AATGAAGCTA ATCTTCAACC CGGTACTTGG
GCAAAGGCTT CCTTTAAAAA TGGCGAGCGA GAAAAAATCC AATTGCCCAC CTCTGCGCTA
CTGACAATGA ACGAACTGAG CAGCGTTTAC CTTAAAAAGG GCGAAGAATT TGTACTCACC
CAAGTCCGTG TCGCTAGTCC CTTAGATGGC GAGGTCGAAG TGCTGGCGGG CCTGAAGTCG
GGCGACAAGG TTGCCGTTGA TGCCTACCAA GTGTTGCTCA ACAAAAAGCA ATAA
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| Protein sequence | MTSISRAFFL LLALASTQVQ AASVETIEVL TKPYANWVTL DATIEAVKAA TVSAQTSGRI
VKLNYDVNDV VPEGAALLEI TSKEQGAELA SFEADLAKAK ALNVEAQAQY KRYKELFPQG
AISKGAMDEA TANAKATEQA VTAAQARVIK ASESLKYTVV SAPFSGVVTE RFVELGETVS
PGQALLSGFS ASQMRAITQV PQRYINQLKI APEFLVRLSD GRELTSKDLT IFSFADPVSH
SYQVRINLPE NEANLQPGTW AKASFKNGER EKIQLPTSAL LTMNELSSVY LKKGEEFVLT
QVRVASPLDG EVEVLAGLKS GDKVAVDAYQ VLLNKKQ
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