| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2858 |
|---|
| Symbol | |
|---|
| ID | 5754636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3406438 |
|---|
| End bp | 3407391 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641289169 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001555284 |
|---|
| Protein GI | 160875968 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.187319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00367272 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA CTGCGCGACT CTCAGCCTCG GCCGATGGCT TGCCGCTGTT TGCCGATGGC
TTGCATTTAA CCGAGCAAGA GCTGCTGGCG TGCCAAAATA TCGCCCGCGC TATGCCTGAG
CGTTACAGCC GTTCCCGCGC TAATTTAGCG GGCCATCGCA GCAGCTTAAT CAAAGGCCGC
GGGATGGAGT TTGCCGAGGT GCGCCACTAT CAACAGGGCG ACGATGTGCG CACCATTGAT
TGGCGCGTGA CCGCTCGCAC GGGCAAAACC CACACTAAGT TATTTGTCGA AGAACGCGAG
CGCCCTATTC TGTTGTTGAT CGACTTGAGC CAAAGTCTCT ATTTTGGCTC AAGTTTATTG
CTGCAATCGG TGCAAGCAGG ACACCTTGCG ACCACCTTAG GTTGGAATGC CATTAACCAT
GGCGATAGAC TCGGCGCCTT GATCGCGTGC GAGTCTGAGC ATTTAGAGCT CAAACCCCGC
AGCCGTCGTC AGGGCATATT GCAATTGATC TCGGGCCTGC GCCGCGTGCA TGAGAATCAA
CTCAATCATG TTGGCAGTGG CCAGCGCGAT CCTGATCATA TTCTGCGCGC TTGTCAGCGA
TTACAACGCA TCGCCAAACC CGGTTCCTTG GTTTGGATAG TGACCGATGG CAGCCATTTT
AGCTCCCAAT GTATCGCGCC ATTAACCGAG CTTAAACGTC ATTGCGATGT GGGCGCCTAC
CTGATTACCG ATCCCCTGCG CCAAGGGACA CTGCCGTTAC CGCACAACTT TAGTTTGCCG
GTACGGGATG GGGATGAGGA CTTAGTGCTC ACCCGCCACA GTTATCAGGC TTGGCTTGAT
ATCCAGCTGC GTCAGCAAAG GGACTTTATC GCCATGATGC AGCAACTGCG CGTGCGCACC
CAGCTCATCG ATGCGGGTGC TCCCCTAGCC CATCAATTGG AATTATTGCG TTAA
|
|---|
| Protein sequence | MSDTARLSAS ADGLPLFADG LHLTEQELLA CQNIARAMPE RYSRSRANLA GHRSSLIKGR
GMEFAEVRHY QQGDDVRTID WRVTARTGKT HTKLFVEERE RPILLLIDLS QSLYFGSSLL
LQSVQAGHLA TTLGWNAINH GDRLGALIAC ESEHLELKPR SRRQGILQLI SGLRRVHENQ
LNHVGSGQRD PDHILRACQR LQRIAKPGSL VWIVTDGSHF SSQCIAPLTE LKRHCDVGAY
LITDPLRQGT LPLPHNFSLP VRDGDEDLVL TRHSYQAWLD IQLRQQRDFI AMMQQLRVRT
QLIDAGAPLA HQLELLR
|
|---|
| |