Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2830 |
Symbol | |
ID | 5754608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3368453 |
End bp | 3370570 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641289141 |
Product | DNA topoisomerase III |
Protein accession | YP_001555256 |
Protein GI | 160875940 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0290514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCT ATATCGCAGA AAAACCTAGC CTAGGGCGGG CCATTGCCGA TGTATTGCCT AAACCCCATA AAAAAGGCGA TGGATTTATC GAAGCCGCCA ATGGCGATTG CGTGTCTTGG TGCGTAGGTC ACTTGCTCGA ACAAGCAGAA CCTGATGCCT ATAATCCCGA ATTTAAGTCG TGGAAATTCG AGCACTTGCC AATAGTGCCG GACAAGTGGC AACTAAAACC TAAGGCCGCA ACTCGCAGCC AACTCACAGT GCTGAAACGA TTAGTCAAAC AAGCTAACAC GCTGGTTAAT GCAGGCGATC CCGATCGTGA AGGGCAATTA CTCGTGGATG AAGTGATTGC CTATCTTGGC GTGACGGGTG ATAAGTTACA TCAAACTCAG CGTTTACTGA TCAGCGACTT AAACCCACAA GCCGTAAAAC GGGCGCTAAC ACAGCTACGC AGTAATCGCG AGTTTATTCC TTTGTCCACA TCGGCCTTAG CCCGTAGCCG CGCCGATTGG CTCTACGGCA TGAATATGAC CCGCGCTTAT ACTATCCAAG GTAAAAAGGT TGGTTATCAA GGCGTATTGT CCGTCGGGCG AGTGCAAACG CCTTTACTCG GGCTAGTGGT GCGCCGTGAT GAAGAGATTG CCAATTTTCA ATCTAAACCT TTCTATGAAG TGCTAGCGCA TTTGGCGACT GAAAAGCAGG AAACCTTCAG CGCTAAGTGG CAACCCAGCG AAGCTTGTCA GCCGTACATG GACGAAGAAG GGCGAGTACT AGCCAGAGGG TTAGCGCAAA ATGTGGTGAG TCGCATCAGT GATAAACCCG CCTTAGTGAC TCAATTAGTG GCTAAGGACA AGAAACAGAA TCCGCCATTG CCCTACAGCT TATCCGCGTT GCAGATTGAT GCGGCAAAAC GGTTTGGAAT GAGTGCTAAG GATGTTCTTG ATACCTGCCA GAGTTTGTAT GAGCGCCATA AACTCATTAC CTATCCCCGT TCCGACAGCC GTTATTTACC CGTCGAGCAA CATAGCCTAG CGCCGTCGGT TCTTAAGGCG ATTCGTAGCG GTGCCGCTGA GTTACTGCAA GGCGCCGATG CCCCCGATCC ACGGCTTAAA TCCAAGGCAT GGGATGATAA AAAAGTGGAT GCCCACCACG CCATCGTTCC TACCGAGAAA ACGGCTAACT TATCCAGCTT AAGTCAGCGT GAGAGGCAGT TATATCTTCA TGTTGCCCGC CAGTACTTAG CCCAGTTTTA TCCGGCCTAT TGTTACAGTG AAACCACGGT ACAAGTGACA ATTGAGGGCG GCTTATTTAA TACCAAGGCG CGTCAGGATA AATCCCTCGG CTGGAAGCAA CTCTTTGCCC GCCAAGAGCC AAATGGTAGT AAGGCGAGTG GTAACAAGTC GACTGAAGAA AGCGCGGGTA AGGATGATGA GGAGAATGAC GAGTTTATCG GCCAATTACC ACCTCTGAAA CTAGGGCAGG CTTTGCATTG TACTCGAGGC GAGTTGCTGG AGAAAAATAC TCAGCCGCCA AAGGCCTTTA CCGATGCCAC TTTACTCGGT GCTATGACGG GGATTAGCCG CTACGTAACC GACCCTGAGA TCCGTAAAAT TCTCAAAGAA ACTGATGGCT TAGGTACAGA AGCTACCCGT GCAGGCATTA TTGAACTATT GTTTAAACGC GGTTTTTTAC AACGCTTAGG TAAATCTATC GTTTCGACGG ATGTGGGTAA GGGATTAATT AACAGCTTAC CCGCGAGTGC AACAACGCCT GACATGACAG CCCTTTGGGA AGCCAGCTTG AACGGTATTT GTCATAAAGA AACCTCCTAT CAAGCCTTTA TGCAACCGCT GCTCGGCACT TTATCCACGC TTATTCAAAA CGCAGGAGCA CAACTGCCCA CCGCGCTTAA TGGTTTAAAA GGCCAAGGTT ATCGTAAAAC GGCTGGGAAT AAATCTGGTT ATCGCAAGTC GCCTTACCGT AAAGCCTCTA GCTCGACAAA ACGCACTGGC ACGGCAAGTA CCGCTAAAAC AAGTACAACG ACAAGTAGCA GTGCGAAAAA GTCGAGTGCG AGTTCAGGGA CTCGGAGTCG AACACGCAAA GTGGCTGCTG AGGTTTGA
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Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGFI EAANGDCVSW CVGHLLEQAE PDAYNPEFKS WKFEHLPIVP DKWQLKPKAA TRSQLTVLKR LVKQANTLVN AGDPDREGQL LVDEVIAYLG VTGDKLHQTQ RLLISDLNPQ AVKRALTQLR SNREFIPLST SALARSRADW LYGMNMTRAY TIQGKKVGYQ GVLSVGRVQT PLLGLVVRRD EEIANFQSKP FYEVLAHLAT EKQETFSAKW QPSEACQPYM DEEGRVLARG LAQNVVSRIS DKPALVTQLV AKDKKQNPPL PYSLSALQID AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPVEQ HSLAPSVLKA IRSGAAELLQ GADAPDPRLK SKAWDDKKVD AHHAIVPTEK TANLSSLSQR ERQLYLHVAR QYLAQFYPAY CYSETTVQVT IEGGLFNTKA RQDKSLGWKQ LFARQEPNGS KASGNKSTEE SAGKDDEEND EFIGQLPPLK LGQALHCTRG ELLEKNTQPP KAFTDATLLG AMTGISRYVT DPEIRKILKE TDGLGTEATR AGIIELLFKR GFLQRLGKSI VSTDVGKGLI NSLPASATTP DMTALWEASL NGICHKETSY QAFMQPLLGT LSTLIQNAGA QLPTALNGLK GQGYRKTAGN KSGYRKSPYR KASSSTKRTG TASTAKTSTT TSSSAKKSSA SSGTRSRTRK VAAEV
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