| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2743 |
|---|
| Symbol | |
|---|
| ID | 5754516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3253058 |
|---|
| End bp | 3255202 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641289050 |
|---|
| Product | peptidyl-dipeptidase Dcp |
|---|
| Protein accession | YP_001555170 |
|---|
| Protein GI | 160875854 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.811217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGT CCGTTATTAC CACAGCCGTG GCCGCGGCTT TGTTACTTGG CGCTTGTTCA
GACAAGCCAG CCGCCAGTGC CAATGAAGCC AAAAATGCCG TAGCGACTCA AACTGCTGCT
AAAGCAGAAG CAACCAATGT GTTGCTGAGC AAGAGTCCAC TGCAGGATCA AGCGCCACAA
TTTAACCTTA TCCATACTGC AGATTATGCT CCTGCCTTCG AGCAAGGCAT TAAAGCCCAT
GATGCTGAAA TCGCTGCCAT TGTGAATAAC AAGCAAGCAG CCAGTTTTGA CAACACCATT
CTGGCGATGG AAACCTCGGG TGAATTATTA ACGCGGGTGT CGCGGACCTT CTTTAATCTC
GCCGGTCTGA TTTCTGATGA TGATTTCCAG AAAACCGAAG CAGATCTTGC ACCTAAGCTA
TCTGCCCATC GCGATAATAT TTATCTCGAT CCAACGTTAT TTGCCCGTGT TGAAGCGGTA
TATCAACAAA AAAGCAGCTT AAATGCGGAA GATCAGCGTT TAGTTGGATA CTACTATGAG
CAGTTTGTTC GCGCTGGCGC GAAATTGTCA GCTGAAGATA AAGCTAAGAT GCGCGACTTT
AACGCCGAGC TTGCAACCTT AGCGACGGAC TTTTCACAAA ACAGCTTAAA ATCATTTAAA
GATGATGTGA TTGTTGTGAC GGATAAAGCC CAGTTAGCTG GTTTATCTGA CAGCGAAATC
GCCACCTTAG CCGCTGCCGC TAAAGCTGCT GGAAAAGAGG GCTATTTGAT TACCTTAGTG
AACACTACTC GCCAGCCTGT GCTTTCTAGC CTGAGCAACC GTGAACTACG CCAAAAAGTG
TGGGAAACTT CGGCGCACAG AGCCGTCGCA ACTAATGGCC CATTGATTGT TAAAATGGCG
CAAATTCGGG CTAAAAAAGC TAACTTATTG GGATTCGATA CTTGGGCATC CTATGCGGTT
GCCGATCAAA TGGCGAAAAC CCCAGCCGCT GTGTATGAAA TCCTCGATGA TTTAGCGCCA
AAAGCCTTAG CACGTGCCAA AGTGGAAGCG GCTGATATTC AAGCTGAAAT CAAAAAGGCG
GGCGGTGATT TCGAACTGCA ACCTTGGGAT TGGGCTTACT ACGCCGACAA AGTGCGTAAA
GAGAAATACG ATCTCGACGA AAGCAGCATC AAACCTTATT TCGAGTTTAA TACTGTGCTG
CAAGACGGGC TGTTTTTCGC GATGCATAAA TTGTATGGCA TCAGCTTAAA AGCGCGTACC
GATTTACCCG TGTGGAATCC CGATGTCTTA GCCTTTGAAG TCTTCGATAA AGACAACAGC
TCTATTGGCT TATTCTACCT TGACCCTTAT GCCCGTGAAG GCAAAGGCGG CGGCGCGTGG
ATGGATGAGT TCGTCACCCA AAGCGGTCTG CTTGGCACTA AGCCCGTTGT TTATAACGCG
CTGAATATTC CTAAGCCAGC CGATGGCCCA ACGTTAATGA CCTTCGATGA AGTGACCACT
ATGTTCCATG AAATGGGTCA TGCGGTTCAC GGTTTATTCT CGCAGGTGAA ATATCCAAGC
GTGGCTGGTA CATCAACTGC ACGTGACTTT GTTGAGTTCC CATCCCAGGT TAACGAAGAT
TGGAATATCG ATCCTGCTGT GATTGCTAAC TATGCCAAAC ACTACAAAAC GGGTGAGCCA
ATTCCTAAGG CACTGCTCGA TAAAATCTTA GCCTCAAATA AGTTTGGCCA AGGTTTTGAT
ACCGTTGAGT ATCTGTCAGC TGCCTTGTTA GATATGGAAT GGCACTCTAT CAGCGCCGAT
ACTCAAATTA GCGATGTAGA GAAGTTTGAG CACCAAGTGT TAGTTAAACA TGGCCTCGAT
TTTGCGCCAA TACCCCCGCG TTATAAATCG AGCTACTTTA GCCATGCCTT CTCCGGTGGT
TATTCAGCTG GATATTATGC GTATTTGTGG ACCGAAGTGT TTGCCGCCGA TGCCTTTGCC
TATATGGGCG AGCATGGTGG ATTGAAAGCC GATAATGGTG ACAAATTCCG TAAAGAAGTC
TTATCTAAAG GTAACAGTGA AGATCTCATG CAAGATTACA TTCACTTTAC CGGTAAGAAA
CCGACAACAG ATGCACTGTT AAAGCGCCGC GGTTTAGTCG ACTAA
|
|---|
| Protein sequence | MRKSVITTAV AAALLLGACS DKPAASANEA KNAVATQTAA KAEATNVLLS KSPLQDQAPQ
FNLIHTADYA PAFEQGIKAH DAEIAAIVNN KQAASFDNTI LAMETSGELL TRVSRTFFNL
AGLISDDDFQ KTEADLAPKL SAHRDNIYLD PTLFARVEAV YQQKSSLNAE DQRLVGYYYE
QFVRAGAKLS AEDKAKMRDF NAELATLATD FSQNSLKSFK DDVIVVTDKA QLAGLSDSEI
ATLAAAAKAA GKEGYLITLV NTTRQPVLSS LSNRELRQKV WETSAHRAVA TNGPLIVKMA
QIRAKKANLL GFDTWASYAV ADQMAKTPAA VYEILDDLAP KALARAKVEA ADIQAEIKKA
GGDFELQPWD WAYYADKVRK EKYDLDESSI KPYFEFNTVL QDGLFFAMHK LYGISLKART
DLPVWNPDVL AFEVFDKDNS SIGLFYLDPY AREGKGGGAW MDEFVTQSGL LGTKPVVYNA
LNIPKPADGP TLMTFDEVTT MFHEMGHAVH GLFSQVKYPS VAGTSTARDF VEFPSQVNED
WNIDPAVIAN YAKHYKTGEP IPKALLDKIL ASNKFGQGFD TVEYLSAALL DMEWHSISAD
TQISDVEKFE HQVLVKHGLD FAPIPPRYKS SYFSHAFSGG YSAGYYAYLW TEVFAADAFA
YMGEHGGLKA DNGDKFRKEV LSKGNSEDLM QDYIHFTGKK PTTDALLKRR GLVD
|
|---|
| |