| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2728 |
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| Symbol | |
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| ID | 5754501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3234528 |
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| End bp | 3235688 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641289036 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_001555156 |
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| Protein GI | 160875840 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.315515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.247333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCATTTT ATGTGAAACA AGGCCAGATC CCCCATAAGC GCCATATCGC ATTTGAAAAG
GAGAACGGCG AGCTTTACCG TGAAGAGTTG TTCTCAACCC ATGGTTTTTC CAATATTTAT
TCCAATAAAT ATCACCACAA CATGCCAACC AAAGCGTTGG AAGTGGCTCC TTACAGCCTA
GGCCACGGTG CCAATTGGGA AGACTCGCTG GTCCAAAACT ATAAACTCGA TTCCCGCGAT
GCCGACCGTG AAGGTAATTT TTTCAGCGCC CGTAACAAGA TTTTTTATAA CAATGACTTA
GCACTTTATA CCGCCAAAGT CACCGCCGAT ACCGACGAGT TTTACCGTAA TGCCTATGCC
GATGAGGTGC TTTTTGTCCA CGAAGGCGAA GGCACACTCT ACAGCGAGTA CGGCACGATT
AAGGTCCAAA AGTGGGACTA TCTCGTGATC CCACGCGGCA CGACTTATCA ACTTAAATTC
AACGATTACA GCAATGTGCG ACTTTTCGTT ATCGAGTCAT TCTCTATGGT GGAAGTGCCT
AAGCATTTCC GTAACGAGTA TGGTCAGCTA TTAGAATCGG CACCTTACTG CGAGCGCGAT
TTGCGCGTGC CCACATTGCA AGATGCTGTG GTTGAGCGCG GCGCCTTCCC CTTAGTATGT
AAGTTTGGCG ATAAGTACCA ACTCACCACA CTAGAATGGC ATCCCTTTGA TTTAGTGGGT
TGGGATGGCT GTGCTTACCC TTGGGCATTC AACATTACTG AATACGCGCC AAAGGTGGGC
AAAATCCATC TGCCGCCTTC TGATCACTTA GTCTTTACCG CCCATAACTT TGTGATTTGT
AACTTCGTGC CGCGTCCCTA CGATTTCCAC CCGAAATCGA TTCCGGCGCC TTATTACCAC
AACAATATCG ATAGCGACGA AGTCTTGTAT TACGTCGATG GCGACTTTAT GAGCCGCACG
GGCATTGAAG CGGGTTATAT GACCTTACAT CAAAAAGGTG TGGCCCACGG CCCACAACCG
GGCCGCACTG AAGCCTCGAT TGGCAAGAAA GAAACCTATG AATACGCAGT GATGGTCGAC
ACCTTCGCCC CACTTAAATT AACCGAACAT GTACAACATT GCATGAGCAA AGACTACAAC
CGCTCTTGGC TAGAAGACTA G
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| Protein sequence | MPFYVKQGQI PHKRHIAFEK ENGELYREEL FSTHGFSNIY SNKYHHNMPT KALEVAPYSL
GHGANWEDSL VQNYKLDSRD ADREGNFFSA RNKIFYNNDL ALYTAKVTAD TDEFYRNAYA
DEVLFVHEGE GTLYSEYGTI KVQKWDYLVI PRGTTYQLKF NDYSNVRLFV IESFSMVEVP
KHFRNEYGQL LESAPYCERD LRVPTLQDAV VERGAFPLVC KFGDKYQLTT LEWHPFDLVG
WDGCAYPWAF NITEYAPKVG KIHLPPSDHL VFTAHNFVIC NFVPRPYDFH PKSIPAPYYH
NNIDSDEVLY YVDGDFMSRT GIEAGYMTLH QKGVAHGPQP GRTEASIGKK ETYEYAVMVD
TFAPLKLTEH VQHCMSKDYN RSWLED
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