Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2679 |
Symbol | |
ID | 5754446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3181700 |
End bp | 3183433 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641288981 |
Product | ATP-dependent protease |
Protein accession | YP_001555107 |
Protein GI | 160875791 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0066735 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.722057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAC TCTTGATACC CACGTCTTCA CTCGCACCTG AATTTAGCCT GCCAACCCTT TCCGAAACGG CTGCCAATCT AAGCGCATTG CTCTTAGGGC AAGAGCGCAC TGTGGACGCG TTTAAACTCC ACCAAGCTAT TGTCGATCAA CACTTGTATC TGGCCGATTT CCCGAGCATT GACCGCCAGT TAATGATCCA AGCCTGTATC GATAGCCTTG CACCTTTTTC CCCTGCGTAT TTAGTGGCGA CACGTCCGAT TGATAAGGCG GTAACATTTC AGTGGCAGTC CGATAAGCCG CAGGAAAATC AAGGAAGTAT TGCTGAGAAA ACAACTCACT ATCGCTACCT CAGTGGCAAT ATTCGCCGCG CAGATTTAAT TGGCCGTATG GCGCAAACAG GGACAACGAG TCAGTATCAA GCTGGTGCCC TAGCCCAATG CCATTATGTG TTTATTTGCG CCGAGTCACT GTGGAAACGT GAAGGTTTAT GGGAGTTAGT GATGCAAATC CTCACCCATA AAGAGTATCA AATTAGCAAT AACTTAAGTC CTATTCCATT GAACTGTAAG ATAGTCCTGG TTGGTGCTGG GATGATTTAT AGCCAAGTCA GAACTGAGGA TTGGCAATTT CAACGTCACT TTACCCTATT AGCGGAACTT GCCAGCGAAA TCGACTTGGT CCGTTATAAA GAGTCACAAT ACGTCGCATG GCTGCAAGCT GTTGCCCAAA GTGTGGATGT CACGCTTGAA CAATCCAGTT TAGCGCCACT CTTTCGCTAT AGTGCACGGT TAACCGAACA TCAGCGTCGC CTCAGTTTAT CTATGCTCGA GTTCGCCCAG CTCATGATGC AAGCTAAAGC CTATCGTGGT AAACCGAGCA TCAATGCAAG CAGTATTGAG CACGCGTTAA CCCAAGCCAA CTATCGTCAT AACAGTTCGG AAGAATATTC GGGCCAAAGC TTCGATGACA ATTTCATAAA TCTGCCAACT TCGGGTGCTA TGGTTGGCCA GATCAATGGC TTAACTGTGA TTGATGCTAT CGATTATAGC TATGGTGAAC CAGCGCGTAT CACGGCATCT GTTCACTACG GTGATGGTGA AGTAGCCGAT ATTGAAAGAA AATCTGAACT TGGCGGGAAT ATACATGCCA AAGGCATGAT GATCCTTTCA GCCTGCTTGT ACCGTATCTT TGGACGAGAT GCGCCATTAC ACCTGAATGC CAATATCGTT TTCGAACAGT CCTATCAAGA AATTGATGGC GATAGTGCAT CACTAGCAGA GTACTGCTGT TTGATGTCAG CGATTGCCGA ACAACCCATT ATTCAATCAC TGGCGATTAC CGGCGCATTG GATCAATTTG GTAATGTGCA AGCGATTGGC GGCATCAACG AGAAGATTGA AGGCTTTTTT AATCTGTGTG AACGCCGCGG ACTTACGGGA GAACAAGGCG TTATTATGCC GAAGTCAAAC GTATTACAAC TTAATCTCAA TCCCAAAGTG ATTACAGCTG TAGGCAAAGG CCTGTTTCAC ATCTATGCCA TTGAACATAT GGACCAAGCG GTTGAGCTAT TAATGCAAAT GCCAGCGGGT GTTGCCGATG AAGATAATGA TTTCCCGCAT GATTCATTAT ATGGTCTCGT GCAGGAACGA TTAGACAAGC TCGCGGGAAA TGGGGAGGAG GAAATCGGCC TAATCACGAG ATTACTCGCA AAATTGGGAT TTTTTCGCCG CTAA
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Protein sequence | MNSLLIPTSS LAPEFSLPTL SETAANLSAL LLGQERTVDA FKLHQAIVDQ HLYLADFPSI DRQLMIQACI DSLAPFSPAY LVATRPIDKA VTFQWQSDKP QENQGSIAEK TTHYRYLSGN IRRADLIGRM AQTGTTSQYQ AGALAQCHYV FICAESLWKR EGLWELVMQI LTHKEYQISN NLSPIPLNCK IVLVGAGMIY SQVRTEDWQF QRHFTLLAEL ASEIDLVRYK ESQYVAWLQA VAQSVDVTLE QSSLAPLFRY SARLTEHQRR LSLSMLEFAQ LMMQAKAYRG KPSINASSIE HALTQANYRH NSSEEYSGQS FDDNFINLPT SGAMVGQING LTVIDAIDYS YGEPARITAS VHYGDGEVAD IERKSELGGN IHAKGMMILS ACLYRIFGRD APLHLNANIV FEQSYQEIDG DSASLAEYCC LMSAIAEQPI IQSLAITGAL DQFGNVQAIG GINEKIEGFF NLCERRGLTG EQGVIMPKSN VLQLNLNPKV ITAVGKGLFH IYAIEHMDQA VELLMQMPAG VADEDNDFPH DSLYGLVQER LDKLAGNGEE EIGLITRLLA KLGFFRR
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