| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2678 |
|---|
| Symbol | |
|---|
| ID | 5754444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3178831 |
|---|
| End bp | 3180828 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641288979 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001555106 |
|---|
| Protein GI | 160875790 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0770699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTAC CAACACGTAT TTCGCAGCGG CTCACTATGG GCAGCATAGT GCTGCTTTTA
CTGACCGGAC TTGCCGTTTT TGGTGTGATG TCACTTAGGG GGCAACCTAG AGTAGTGGCG
GCGAGTCAAG AGTTAATCGA GCAAACCGGT AGCAGTATCG TGAGGCAACT CGCGCTCAAA
CTTGCAAGCA TTGAGGGCAT TACCTTAAGC CTTGCACACC TCGCAGAAGT GTTACCCCAC
GAGCAAGCTC TTTACCTTAA TTCCTTACCT AATCTAATTG ATAACAATGG CGATCTCACT
ATCGCTGGCG GCGGGATCTG GCCTGAGCCG GATAAATTTG TCGCTGGAAG CGCCCGCCAT
AGTTTTTTCT GGGCCCGTGG TAGCGATAAT TTACTGGCTT ATTCAGATGA CTATAATGCG
CAATCTGGTC CTGGCTATCA CAATGATCCT TGGTATACCG GGGCACGCAC AAGTTCTGTA
TCTCAGTGTT TATGGTCTGA AGCCTATCAG GATACCGTTA CAAAAGTGGC TATGGTGACA
TGCAGTGTGC CATATCGTCT GACGGGGAGA TTTGCCGGGG TCGCAACAAT AGATTTGAAA
CTTGATGATT TAGCAAAATT TCTAACAGAA CATGGCAATG TAACTGACGG TTATGCTTTT
GCTTTAGATC AAGCGGGTAA TATCTTGCAT TTTCCTGAAG CGAATAAGTC CGACACTATG
CTGCGCTTCA CCGATCTCGT CGGGCAGTTA CCTTGGCTTG CCCCCGTTGA AGCTGCGCTT
AAACAAACCA CAATTAATAA CGTTATTTCA GTGAGTTTAG ATAAGGATGG AAGACTCAAT
CAGGCGAGCG AGGTAAGCCT TTTTGTGATG CCTGATACCG GATGGGTGAT TGGTCTTGTG
ACGCCAAAGA CCCGAGTCAC AGGGCTTGCC CGTGAGCTGA CCTTTGATAT TTTGTTGTTT
TTATTGCCCT TGCTCGCCAT TTTACTTTAT TTGGCTTGGT TGTCGGGTAA AAAACTGTTG
GCGCAACTTG AGGAAACCAC AGATCAAATT GCTTCCCTTG GGAGCGGTAA TTTGGGCGCC
AATGTCGAGC TGCAAATTCA GCGGGATGAT GAAATTGGCG CTTTGCGTCG AGCTGTAAAT
ACCTATGCGG GTACACTGAG GGCAATGCTC GATTTGATCA CCCAAGAGGC GAAGAAAGTT
CAGTTTGAGG CAACGCAATT AAGTGGTCTT AGCCATAGGT TAGCCCAACG TGCGGAACAA
CAGCGGCTCG AGAGTGCGCA ACTCGCCGCG GCGATAACAC AAATGTCTTC AAGCGCGATG
GAAGTGGCAA ATAACACTAA TGATTGTGCT GCAACAGCGC AATCTTCTTT AATTGTGGTG
CGAGAAGGGC AAACCCGAGT GGCATCCAGC AATGCTTCCA TTGAGGCATT AGCGGGGGAA
ATCGCCAATG CAACCAAGGT GATATCCCAG TTGGCTCAAG ATAGCCAGAA AGTGGGCGCC
GTATTGGATG TGATCAAGGC GATTTCTGAG CAAACTAATC TATTAGCGTT AAATGCGGCT
ATAGAAGCAG CAAGGGCGGG GGATCAGGGT CGTGGCTTTG CGGTTGTTGC CGATGAAGTA
CGGACTCTTG CGGGGCGAAC TCAAGATTCC GCCAATGAAA TCAGTACCAT GATTAATGCT
TTGCAATCAG CATCTCGGCT TGCGGTACAA GCGATGCAAA CGGGCGAGTC CAGCACTGTC
CACGCAGTTG CTGAGGCTGA GGGAGCGGCC AGTTCTCTAT CGAGTACTGT ACAAAGTTTC
GATGATATTT CGCAGCGAGC CCAGCAAATT GCTTTAGCTG CTCAGCAACA AAGCCAAGTG
ACTCAGGAGA TCAATGAGTT GGCGGTGAGG ATTAATAGCA TTAGTGAAGA TAACTCACTT
GATGCGACCG CACTCGATGC GTTAAGCCTT GAAATGCAGA AACTATCCGA CCGTTTAATC
AATATTAATC GAGCTTAA
|
|---|
| Protein sequence | MLLPTRISQR LTMGSIVLLL LTGLAVFGVM SLRGQPRVVA ASQELIEQTG SSIVRQLALK
LASIEGITLS LAHLAEVLPH EQALYLNSLP NLIDNNGDLT IAGGGIWPEP DKFVAGSARH
SFFWARGSDN LLAYSDDYNA QSGPGYHNDP WYTGARTSSV SQCLWSEAYQ DTVTKVAMVT
CSVPYRLTGR FAGVATIDLK LDDLAKFLTE HGNVTDGYAF ALDQAGNILH FPEANKSDTM
LRFTDLVGQL PWLAPVEAAL KQTTINNVIS VSLDKDGRLN QASEVSLFVM PDTGWVIGLV
TPKTRVTGLA RELTFDILLF LLPLLAILLY LAWLSGKKLL AQLEETTDQI ASLGSGNLGA
NVELQIQRDD EIGALRRAVN TYAGTLRAML DLITQEAKKV QFEATQLSGL SHRLAQRAEQ
QRLESAQLAA AITQMSSSAM EVANNTNDCA ATAQSSLIVV REGQTRVASS NASIEALAGE
IANATKVISQ LAQDSQKVGA VLDVIKAISE QTNLLALNAA IEAARAGDQG RGFAVVADEV
RTLAGRTQDS ANEISTMINA LQSASRLAVQ AMQTGESSTV HAVAEAEGAA SSLSSTVQSF
DDISQRAQQI ALAAQQQSQV TQEINELAVR INSISEDNSL DATALDALSL EMQKLSDRLI
NINRA
|
|---|
| |