Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2653 |
Symbol | |
ID | 5754412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3144052 |
End bp | 3144918 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641288947 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001555081 |
Protein GI | 160875765 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.66408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATC CACAGTGGTT ACACACCTTT GCTGTTCTGG TCGAGAAAGG TAACTTCACC CGAACCGCCG AAGCCATTGG TATCACCCAA GCGGCCGTGA GCCAACATAT CAGTCGCTTA GAAGAGGAAT ACGGCACACT GTTTTTACGC CGCCCCCGTC AACTTGAAAT CACTCCGATT GGCGAAAACC TGCTGACCTA CGTTAAAGAC GTCGAATGCG CGCAAAAACG CTTACAGCAG AAACTGATCC ATGATGATGC TGAGGTCGGC GACATTAGCC TTATCACTCC GGGGAGCATT GGTTTAACAC TCTTTCCGCT ATTAATCGAA CTTCAACAAG CCTTTCCGGC GTTAAACATT CGCCACCGCT TTGCCCCTGA CAGTGAGATA GTCGCCTCAG TCTTAGCCAA TGAACATGAA ATCGGCATGG TGACCTTAAA ACCTTCCGAT CCTCGCATTC ACAGCACGCA TTTCACCGAA GAGCCGCTTG AGCTCGTCGT ACCTGCGTGC CACAAACAAA ATGAATGGGT TGATTTACAA CGGTTAGGGT TTATCTCCCA TCCCGATGGC GAGGCCATGG CAACTCGGTT ACTTAGCCGA AAATATCCAA GTAATCCCGG TATTCAAGAC ATTCCCTGTA AAGGATTTAC CAACCAAATC AGCCTGATCC TTGAGCCTGT CGCGAAAGGA CTAGGATTTA CAGTTATACC GCAATACGCC CGCAAAGCCT TTGAACGACA ACAAGATATC TATGTCGTTG AATGTGGCAG CCAAGTTGTA GACACCATTT GGCTTATCCA CCGCGCGGAA TGGCCCTTGT CACGCAGAGC CCAAAAAGCA ATCGCGTTTT TAAAGGGGAA GATATAA
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Protein sequence | MINPQWLHTF AVLVEKGNFT RTAEAIGITQ AAVSQHISRL EEEYGTLFLR RPRQLEITPI GENLLTYVKD VECAQKRLQQ KLIHDDAEVG DISLITPGSI GLTLFPLLIE LQQAFPALNI RHRFAPDSEI VASVLANEHE IGMVTLKPSD PRIHSTHFTE EPLELVVPAC HKQNEWVDLQ RLGFISHPDG EAMATRLLSR KYPSNPGIQD IPCKGFTNQI SLILEPVAKG LGFTVIPQYA RKAFERQQDI YVVECGSQVV DTIWLIHRAE WPLSRRAQKA IAFLKGKI
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