Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2630 |
Symbol | sdhA |
ID | 5754389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3116096 |
End bp | 3117862 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288924 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001555058 |
Protein GI | 160875742 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0015925 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0726397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATTC CAGTACGCGA ATTTGATGCT GTAGTGATCG GTGCCGGTGG CGCTGGTATG CGTGCAGCGC TGCAGATTTC CAAAGAAGGT AAAAGCTGTG CGCTTTTATC AAAAGTATTC CCAACCCGTT CTCATACCGT ATCTGCGCAG GGTGGTATCA CTGTTGCGTT AGGTAACGCC CATGAAGATC ATTGGGAACA ACACATGTAC GATACCGTGA AAGGTTCCGA TTTTATCGGT GACCAAGAAG CGATCGAGTT CATGTGTAAA ACCGGTCCTG AAGCCGTGAT TGAACTTGAG CAAATGGGTT TGCCTTTCTC TCGTTTCGAA AATGGTACGA TTTACCAACG TCCATTTGGT GGTCAATCTA AGAACTTTGG TGGCGAGCAG GCTGCGCGTA CTGCGGCAGC TGCCGACCGT ACTGGTCATG CTTTGCTTCA CTGTTTATAC CAACAAAACG TTAAGCATAA GACGCAAGTC TTCTCAGAAT GGTATGCATT AGATCTCGTT AAAAACGATG ATGGCGCCGT TGTGGGTTGT ACTGCGATTG AAATTGAAAC GGGCGATATC GTTTATTTCA AAGCTAAGGC AACGATTCTA GCGACAGGTG GTGCAGGGCG TATTTACGCT TCTACTACTA ACGCGCATAT CAACACCGGT GACGGCGTAG GTATGGCAAT GCGTGCTGGC GTGCAAATGC AAGACATGGA AATGTGGCAA TTCCACCCAA CTGGCATCGC CGGCGCGGGT GTACTTGTGA CTGAAGGTTG TCGTGGTGAA GGCGGTTATC TGCTGAACAA AGACGGCGAG CGTTTCATGG AGCGTTATGC CCCTAACGCG AAAGATTTGG CATCACGCGA CGTGGTAGCA CGTTCAATGA TGACTGAAAT CCGCGAAGGT CGTGGTTTAG ACGGTCCATT AGGTCCACAC TGTTTACTCA AGCTTGATCA CTTAGGTAAA GAAACATTAG AAGCACGTTT ACCAGGCGTG TGTGAATTGT CTCGTACCTT TGCTCATATC GATCCGGCCG ATGGTCCAAT CCCAGTATTA CCAACCTGTC ACTATATGAT GGGCGGTCTG CCAACTAAGG TCAGTGGTCA AGTTATTCGT AAGAATGAAG ACGGCACTGA ACACGATGTT ATCGGTCTGT TTGCTGTGGG TGAGATTGCC TGTGTATCTG TTCACGGTGC AAACCGCTTA GGTGGTAACT CATTGCTCGA CTTAGTGGTC TTTGGCCGCG CAGCGGGTCA GCATTTAGGT AAAGCTTTGG ATGAGACTGA CGATCCAAAA GACGCAAGCG ATGCGGATAT TCAAGCATCT CTGGCGCGTC TGAATCGTTG GGAAAGCAAC AAAGATGGCG AAGATCCAGC GCAAATCCGT AAGGATCTGC AACTGTGTAT GCAATTAAAC TTCTCTGTAT TCCGTCGTGG CGATGCTATG GCTGAAGGTT TAGAGCAGTT GAAAGTGATT CGCGAACGTC TTGCAAATGC TAAATTGTCT GATAACTCTC GTGAATTCAA CACTCAACGT ATTGAATGCT TAGAGTTAGA TAACTTAATG GCAACGGCGA TTGCAACGGC TTATGCGGCT AACTTCCGTA CTGAAAGTCG CGGTGCTCAC TCACGTGAAG ATTATTTAGA GCGTGATGAT GAGAACTGGT TATGCCACAG CTTATTTGAC CCAATCACTG AAACGATGGA TCGTCGTGCA GTGAACATGG CACCTAAGTT ACGTGAAGCA TTCCCGCCGA AGAAACGTAC CTACTAG
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Protein sequence | MSIPVREFDA VVIGAGGAGM RAALQISKEG KSCALLSKVF PTRSHTVSAQ GGITVALGNA HEDHWEQHMY DTVKGSDFIG DQEAIEFMCK TGPEAVIELE QMGLPFSRFE NGTIYQRPFG GQSKNFGGEQ AARTAAAADR TGHALLHCLY QQNVKHKTQV FSEWYALDLV KNDDGAVVGC TAIEIETGDI VYFKAKATIL ATGGAGRIYA STTNAHINTG DGVGMAMRAG VQMQDMEMWQ FHPTGIAGAG VLVTEGCRGE GGYLLNKDGE RFMERYAPNA KDLASRDVVA RSMMTEIREG RGLDGPLGPH CLLKLDHLGK ETLEARLPGV CELSRTFAHI DPADGPIPVL PTCHYMMGGL PTKVSGQVIR KNEDGTEHDV IGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGQHLG KALDETDDPK DASDADIQAS LARLNRWESN KDGEDPAQIR KDLQLCMQLN FSVFRRGDAM AEGLEQLKVI RERLANAKLS DNSREFNTQR IECLELDNLM ATAIATAYAA NFRTESRGAH SREDYLERDD ENWLCHSLFD PITETMDRRA VNMAPKLREA FPPKKRTY
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