Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2591 |
Symbol | mnmA |
ID | 5754350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3065423 |
End bp | 3066601 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288885 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001555019 |
Protein GI | 160875703 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000333561 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0605714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGGC TTAACTTCAA CAACCTAGCC AACACACATA CTCAATGGTT TTTAGGATCT ATGACATCAA TCGAACCCAC TCATACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT GTAGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT TTCATGAAGA ACTGGGAAGA AGATGACAAC AACGAGTACT GCGCTGCCGC AGAAGATTTA AAAGATGCCC AAGCCGTATG CGACAAGCTC GGGATCAAGC TACACACAGT TAACTTTGCA GCCGAATATT GGGACAATGT CTTTGAGTAT TTCCTCGCCG AATATAAAGC CGGCCGCACG CCAAATCCCG ATATCATGTG CAACAAAGAA ATCAAATTTA AGGCATTTTT AGAATTTGCC GACGAAATCC TCGACGCCGA TTACATCGCC ATGGGCCACT ATGTGCGCCG CCGCGATAAT ACCGATGGCA GCACACAAAT GCTCCGTGGC GTCGATGGCA ATAAAGATCA AAGTTATTTC CTCTACACCC TTAGCCACGA GCAAGTGGCC CGAAGTCTGT TCCCTGTCGG TGAATTGGAA AAACATGAAG TACGTGAAAT CGCAAAAGAA ATGGGCCTAA TCACCCATGA TAAAAAAGAC AGCACCGGCA TCTGTTTTAT CGGTGAGCGC AAGTTCACTG AATTCCTGGG CACTTATTTA CCAGCACAGC CTGGCAATAT CGAAACCCCA GAAGGCGAAG TCATAGGCAC ACACCAAGGG CTGATGTACC ACACCTTAGG CCAGCGTAAA GGCTTAGGCA TTGGCGGCAT GAAAAACAGC AATGACGATC CTTGGTATGT CGTCGATAAA GATCTTGAGC GTAACGTGTT GATCGTAGGG CAAGGCGGAC ACCATCCTCG TTTGATGTCG ACCGGCATGA CAGTTAACCA ACTGCATTGG GTGGATAGAA CCGGACCTAT CGATGGCTGT CATATCGCAG TGAAAACCCG TTATCGCCAA CAAGATGTGC CTTGTACTTT GACCTACACA GATGAACACA CCTTGCGCGT GGTCTTCGAT GAACCTGTTG CGGCGGTGAC GCCAGGACAG TCTGCGGTAT TTTATGATGG TGAAGTCTGC CTAGGTGGCG GCATCATAGA TCAATTGATC CGAGGGTAA
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Protein sequence | MSRLNFNNLA NTHTQWFLGS MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN NEYCAAAEDL KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLEFA DEILDADYIA MGHYVRRRDN TDGSTQMLRG VDGNKDQSYF LYTLSHEQVA RSLFPVGELE KHEVREIAKE MGLITHDKKD STGICFIGER KFTEFLGTYL PAQPGNIETP EGEVIGTHQG LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLERNVLIVG QGGHHPRLMS TGMTVNQLHW VDRTGPIDGC HIAVKTRYRQ QDVPCTLTYT DEHTLRVVFD EPVAAVTPGQ SAVFYDGEVC LGGGIIDQLI RG
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