| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2588 |
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| Symbol | |
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| ID | 5754347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3061284 |
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| End bp | 3063509 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641288882 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001555016 |
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| Protein GI | 160875700 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.540941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0688936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC
ACCCTCTCAC TCTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA
ACCCGTGATA TCTCGTTATC GGGCCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA
GCACAAAAGA TTGGCGATCA TCTGACTGAG CTTGGCGAGT TAGCGAATCA GCCAGAAGCG
AACATCATCA AGTTACCGAA TATCAGTGCT TCGATTCCAC AATTAAAAGC CTGTATCCTT
GAACTGCAGC AAAAAGGTTA CGACATCCCT CACTATCCGG ATGAGCCAAA AACCGACGCT
GAAAAGTCAA TTAAAACACG TTACGACAAG ATTAAAGGCA GTGCGGTAAA CCCAGTACTA
CGTGAAGGTA ACTCAGATCG CCGTGCCCCA TTATCGGTGA AAAACTTCGC CAAGAAAAAT
CCGCATTCAA TGGGTAAATG GGCTACAGAT TCTAAGTCAC ACGTTGCTCA CATGACTGAC
GGCGATTTCT ACGGCAGCGA GCAGTCAGTG ACTTTATCTG ATGCGGGCAG CGTGAATATC
GTGCTGACGC AAAAAGATGG CCAAGAAGTG GTGCTGAAAT CGGGTCTTAA GCTGCTGGCT
GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT
GAAATCGAAA ACGCCAAAGC AGAAGATGTG CTGTTATCGC TGCATCTGAA AGCCACTATG
ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCTGTGA AGGTATTCTT CAAGCCAGTG
TTTGACAAGC ATGCGGCGCT TTTTGCTGAA TTAGGCGTAG ATGTTAACAA CGGTTTTGGT
GATGTTTATG CCAAAATAGC GACATTACCT GCCGATAGCC GCGCCGAAGT CGAAGCCGAT
ATCGCCGCCG TTTACGCTGC ACGTCCCGCA TTGGCTATGG TTGATTCTGA CAAAGGTATC
ACCAACTTAC ACGTGCCAAG CGACATCATT ATCGATGCGT CTATGCCTGC TGCGATTCGT
TCATCTGGCC AAATGTGGGG ACCAGATGGT CAACTGCATG ACACTAAAGC TATGATCCCA
GATCGTTGCT ATGCCGGTAT CTACCAAGAA ACGATTGCCT TCTGTAAAGA GCACGGCGCT
TTTGATCCTA AAACCATGGG CAGCGTGCCA AACGTGGGCT TGATGGCGCA AAAAGCCGAA
GAGTACGGCA GCCACGATAA GACCTTTGAA ATACCTGCTG ACGGTGTGGT CAACGTTGTC
GATGCCAGTG GTAAGGTATT GATGAGCCAT AACGTGGAAG CGGGCGATAT CTGGAGAATG
TGCCAAGTTA AAGACGCACC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT
TTAAGCAATA CACCTGCGGT ATTCTGGTTA GATAGCAAAC GTGCCCACGA TGCTCAAATC
ATTGCAAAAG TGCAGCAATA TCTGCCAGAG CATGATACTG ATGGCTTAGA GATCAGCATT
ATGTCTCCAG AAGAAGCGAC TCGCTTCTCG TTGGCTCGCA TCAAAGAAGG CAAAGATACC
ATTTCAGTTA CGGGCAACGT TCTACGTGAC TACCTGACTG ACTTGTTCCC TATCCTAGAG
CTGGGCACCA GTGCCAAAAT GCTATCAATC GTTCCGTTAA TGAACGGTGG TGGTCTATTT
GAAACTGGCG CGGGCGGTAG TGCACCTAAG CACGTGCAAC AGGTTGAGAA AGAAGGTCAC
TTACGTTGGG ACTCTCTGGG TGAATTCTTG GCTCTGGCTG CGTCTCTTGA GCATTTAAGC
CAAACTGTCG GTAATCCAAA AACCCAAGTG TTAGCTGATA CCTTAGATCA AGCCATTGGC
CAATTCTTAG ATAGCAACAA ATCGCCATCA AGAAGAGTCG GTGAGTTAGA CAACCGTGGC
AGCCATTTCT ACTTAGCCAT GTACTGGGCA CAAGCCTTAG CCGCGCAAAC GGGCGATGAG
CAGTTACAAG CCCACTTCAT TCCGTTAGCG CATGCGTTGG CGGCAAATGA GCAAGTGATT
GTGGCTGAAT TAGCGACGGC ACAAGGTGCA CCAGTCGATT TAGGCGGTTA CTACCGTTTA
GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA GCTGTTGATT
GCTTAA
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| Protein sequence | MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE
AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP HYPDEPKTDA
EKSIKTRYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWATD SKSHVAHMTD
GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER
EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG
DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE
EYGSHDKTFE IPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR
LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLEISI MSPEEATRFS LARIKEGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTVGNPKTQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELATAQGA PVDLGGYYRL
DAAKAEKAMR PSETLNKLLI A
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