| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2568 |
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| Symbol | yebU |
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| ID | 5754327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3042151 |
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| End bp | 3043668 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641288862 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
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| Protein accession | YP_001554996 |
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| Protein GI | 160875680 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.378579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.101279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATACT CGCGCCAGTT GATACACAGT CTATTTTCCT ATGGTTCAAT GAAATCAATG
GTTCAATTAA ATCAAAATTT TATCGATACA ATTACCCAAG AACTCCCCGC CCATTTATCC
ATGGACGAGT TTATTGCCGC TTGCGACAGG CCGCTTAGAC GTTCAATTCG GGTCAATACC
TTAAAAATCA GCAGCGACGA CTTTAAGACT CTGATGCAAC CTAAGGGCTG GACGTTTGAT
CCTATTCCTT GGTGTGAAGA CGGATTTTGG ATCAGTTACG ATGAAGAAGA ACAACTCGGC
AATGCCTTAG AGCACATTCA GGGCTTATTC TACATTCAAG AAGCCAGCTC TATGTTGCCG
CCAACCGCAC TTTTTACGCC TAGTGCATTT ACGACTAGTA CAAAGTGGCA GTGCGTTCTC
GATCTCGCCT CTGCGCCGGG TTCAAAAACC ACGCAAATGG CCGCATTGAT GCAAAACCAA
GGTTTATTGG TGGCGAATGA GTATTCGGCG AGCCGCGTGA AAGTATTGCA CGCCAATGTG
CTGCGCATGG GCGCAAGCCA CTGCGCCCTC ACCCATTTCG ATGGCCGCGT GTTTGGCGAA
TACCTGTACG AAAGTTTCGA TGCCGTGCTC ATTGATGCGC CCTGTGGCGG CGAAGGCACA
GTGCGTAAAG ACGCCGATGC GTTAAAACAT TGGAGCCTTG ACGATGTGTT GGCGATTAGC
GAAACCCAAA AAGCCTTAAT CGAATCGGCG TTTCTCGCCC TGAAACCCGG CGGCAGTTTG
GTCTACTCGA CCTGCACCTT AAACCGTCTC GAAAACCAAG GCGTGTGCGA GTATTTAAAG
CAAGTCTACG GCGATGCCGT GCAATTTGAA TCCTTAAGTG ATTTATTTGA TGGCGCTGAG
CGAGCCACGA CTGCCGAAGG CTTCTTGCAT GTCTGGCCGC AGATTTACGA CAGTGAAGGT
TTCTTTGTCG CTAAATTGAC AAAAACTGCC TCTGTGCCGC GATTACTGCC TGAGCCTAAA
CTGCAGAAAA ACTTCCCCTT CACGCCCGCA TCAGCGAAAC AAGCCCAAGG GATCAAAGAC
TATTTTCAGC AGGATTTAGG CATCAGCTTA CCAGACGAAC TCATCATGGT TCGCGATGAT
GAATTCTGGC TATTTCCCCA TGAATTCAAC GCTTTTATCG GTCGTATGCG CTTTCAGCGT
ATTGGCATTA AACTCGCCGA TAGCAGTAAG CACGGCTTTA AAGTCCGCCA TGAAGCGATT
ATTGCATTAG CGGGAAAACA GCTTAGCCCA ACGGCAAAAA CGGTCGATGT GAGCGATGTT
GAAGCCAAAG AGTATTTGAT GGGGCGAGAT ATTCCCTTAG CGACCGCAGG CAAAGCCCAA
GGTGAAGTGA TCGTCTGTTA TGGCGGCGCG CCATTAGGCA TGGCGAAACA TTTAGGCAAT
AAGTTAAAAA ACAACCTGCC CAGAGACTTA GTGAAAGATA AAGTGTTATT GCTACCAGAA
CAGACAAAAT CGTTATAG
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| Protein sequence | MIYSRQLIHS LFSYGSMKSM VQLNQNFIDT ITQELPAHLS MDEFIAACDR PLRRSIRVNT
LKISSDDFKT LMQPKGWTFD PIPWCEDGFW ISYDEEEQLG NALEHIQGLF YIQEASSMLP
PTALFTPSAF TTSTKWQCVL DLASAPGSKT TQMAALMQNQ GLLVANEYSA SRVKVLHANV
LRMGASHCAL THFDGRVFGE YLYESFDAVL IDAPCGGEGT VRKDADALKH WSLDDVLAIS
ETQKALIESA FLALKPGGSL VYSTCTLNRL ENQGVCEYLK QVYGDAVQFE SLSDLFDGAE
RATTAEGFLH VWPQIYDSEG FFVAKLTKTA SVPRLLPEPK LQKNFPFTPA SAKQAQGIKD
YFQQDLGISL PDELIMVRDD EFWLFPHEFN AFIGRMRFQR IGIKLADSSK HGFKVRHEAI
IALAGKQLSP TAKTVDVSDV EAKEYLMGRD IPLATAGKAQ GEVIVCYGGA PLGMAKHLGN
KLKNNLPRDL VKDKVLLLPE QTKSL
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