Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2555 |
Symbol | |
ID | 5754314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3025051 |
End bp | 3026067 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288849 |
Product | BNR repeat-containing protein |
Protein accession | YP_001554983 |
Protein GI | 160875667 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0401334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0919283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTTTC GCATCCTTCA GTGTGTTGCT GCATTAAGTT TCGGTGGCGC TTTTTTCCCT TCTACGTTAT CTGCAACGCC CTCTGATCCG ATTTTTTCTC AAATTCAACC GCTTGCGGCT TCATCCCTGA TTTTAGATAT TGCCAACGTG GGCAAAGGGT TAGTGGCTGT GGGTGAACGC GGTCATGTTC TAGTGTATGA CGGCAGTTGG CATCAAGTGG CGACGCCCGT GAGCTCGCAG TTGACCAAAG TGTTTTTCCT TAATGACAAA CTCGGCTGGG CCGTGGGCCA TGATGCGACC ATTTTACATA CTCAGGATGG TGGCCAAACT TGGCAGCAGC AGATGCATTC GCCCGAGATT GAAAAGCCAT TCCTTGATGT GGTCTTTTTA GATGAAAACA TAGGGTTCGC CATTGGGGCT TACGGTTTGT TTTATCGCAC CAACGATGGT GGTGCCCATT GGATCGACGA GTTCCATGAG GAGCTGTTAG CCGAAGAAGA TGTGTCCTAT TTAGCGGAGT TGAAAGGCAG CGATCAATCA GCCTATGTGA GCGCACGCGC TTCATTATTG CCGCACTTTA ATCGTATTTT AACCTTGACT GACGGACGTT TATTACTGGT CGGCGAGTTA GGCCTAGTGG CCGTTTCAAG CGATCAAGGC CAAACGTTTG CGCGTACCAG TTTTGATTAC GATGGCTCTA TGTTTAATGC CATTGAAACG AGAGATGCCG TGTATGTGAT GGGCCTTCGC GGTCATATAT TCAAAGCTGA CGTGAGTTTA AGCCAGTGGA ATGAAATCGA ACTTCCAGTG CAATCTTCAA TCAATGGGGC GATGTCAGTA TCGGACGATG CGGTTTATCT CGTGGGAAAT GCAGGGATAG TGATTAAGCT GAATGGGGAT GATACCAGCA GTATTGTCAC TCGTCGCCAA GGGGAAAACT TAGTCTCTAT TGCGAAGGAT AATCAAGGGA ATATGTGGTT ATCCGGCAGC CAAGGGCTGT TTATTCTTAA GCCATAA
|
Protein sequence | MSFRILQCVA ALSFGGAFFP STLSATPSDP IFSQIQPLAA SSLILDIANV GKGLVAVGER GHVLVYDGSW HQVATPVSSQ LTKVFFLNDK LGWAVGHDAT ILHTQDGGQT WQQQMHSPEI EKPFLDVVFL DENIGFAIGA YGLFYRTNDG GAHWIDEFHE ELLAEEDVSY LAELKGSDQS AYVSARASLL PHFNRILTLT DGRLLLVGEL GLVAVSSDQG QTFARTSFDY DGSMFNAIET RDAVYVMGLR GHIFKADVSL SQWNEIELPV QSSINGAMSV SDDAVYLVGN AGIVIKLNGD DTSSIVTRRQ GENLVSIAKD NQGNMWLSGS QGLFILKP
|
| |