Gene Sbal195_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2552 
Symbol 
ID5754311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3016511 
End bp3017530 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content43% 
IMG OID641288846 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_001554980 
Protein GI160875664 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.050028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATA AAATCGCACA GAAAGTCATG TTTCAGATGG ATCCTGAGCG AGCTCACCAT 
CTTGCTATAG GCAGTCTAAA AATGACCGCC AATAGCCCGT TAACGTGTCT GTACGGACAA
ACGATTGCAC CGGCTCCCGT GAGCGTTATG GGACTGACTT TTCCTAACCC AGTGGGACTC
GCTGCGGGTA TGGACAAGGA CGGCGAATCG ATTGATGCCT TTCATGCGAT GGGATTTGGT
CATGTTGAAG TGGGCACTGT GACCCCAAGA CCACAACCCG GTAATGATTT ACCCCGTCTA
TTTAGATTAA AGCCTGCCAA AGGCATTATT AATCGCATGG GGTTCAATAA TAAAGGTGTC
GATAATCTGG TCAAAAATTT GATCGCTAAA AAGACCGACA TTATGGTTGG CGTCAATATT
GGTAAAAATA AAGACACCCC AGTAGAACAA GGTAAAGACG ATTATTTGAT CTGCATGGAT
AAAGTTTATC TCCATGCGGC TTATATTGCG GTGAATATTT CATCACCCAA TACCCCAGGA
TTGCGATCGC TACAATATGG CGATCTATTA GATGAATTAT TGAGCGCAAT TAAGACTAAG
CAACTTGAGC TGGCCGAAAA GCATAAAAAA TACGTGCCCA TCGCGCTTAA AATTGCCCCA
GATTTAACCA TCGAAGAAAT TGAAAATATT GCGCAAGCTT TGATTAAAAA CAAATTTGAT
GGCGCAATTG CAACTAATAC CACCTTAACG CGTGATGGTG TTAGCGGCCT TGCCAACGCC
AATGAAAGCG GCGGCTTAAG CGGCAAACCG TTGACAGAAC TGTCTACTAA AGTGATCAAG
CAGCTAGCTA TGTGCTTGAA AGGGCAGATC CCGATCATCG GTGTGGGCGG TATCAATAGT
GCCGAAGATG CCTTAGCCAA ATTTGATGCG GGTGCCACTA TGGTGCAGAT TTATTCGGGT
TTTATTTATC AAGGTCCGAA GTTAATTAAA GAAATTGTGA ATGCATACCG CTTAAAATAA
 
Protein sequence
MFYKIAQKVM FQMDPERAHH LAIGSLKMTA NSPLTCLYGQ TIAPAPVSVM GLTFPNPVGL 
AAGMDKDGES IDAFHAMGFG HVEVGTVTPR PQPGNDLPRL FRLKPAKGII NRMGFNNKGV
DNLVKNLIAK KTDIMVGVNI GKNKDTPVEQ GKDDYLICMD KVYLHAAYIA VNISSPNTPG
LRSLQYGDLL DELLSAIKTK QLELAEKHKK YVPIALKIAP DLTIEEIENI AQALIKNKFD
GAIATNTTLT RDGVSGLANA NESGGLSGKP LTELSTKVIK QLAMCLKGQI PIIGVGGINS
AEDALAKFDA GATMVQIYSG FIYQGPKLIK EIVNAYRLK