| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2508 |
|---|
| Symbol | |
|---|
| ID | 5754267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2959057 |
|---|
| End bp | 2959752 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641288802 |
|---|
| Product | lipoprotein releasing system, ATP-binding protein |
|---|
| Protein accession | YP_001554936 |
|---|
| Protein GI | 160875620 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.214498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0731118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACG TGTTACTGCA AGTGCAGAGT GTCAGTAAGA GTTACCATGA TGGCGCCGTG
ACCACGCAAG TGTTGTCTAA TGTTGATCTG CAAGTGTTTA AGGGCGAGCA GTTGGCGATT
GTCGGCAGTT CAGGCTCAGG TAAAAGTACC TTGCTGCACA TCATGGGCAC GTTGGATGAA
CCAACCGCAG GTAAAGTCTT GCTGTTAGGC GAAGATTTAT ATCAAGTGTC CAGTGCACGC
CAAGCGCAGA TCCGTAACCA AGACTTAGGT TTTATCTATC AATTCCATCA TTTATTGCCA
GAATTTACCG CGCTAGAAAA CGTCGCTATG CCAGCGTTTA TTCAAGGTAA AGATCGTAAG
CTGGCGCTCG CCGATGCTAA AGCCTTGTTG GAGCGGGTCG GGTTAGGGCA TCGCATGACG
CACATTCCTG CCGAGCTATC TGGCGGCGAA CGTCAACGTG TGGCTATCGC AAGGGCCTTG
ATTAATAAAC CTAAATTAGT GCTGGCCGAT GAACCTACGG GTAACTTAGA TGCCAACAGT
GGCGATGCGG TTTATGAGTT GATCCGCGAA CTCGCCGAAC AACTGGGTAC GGCGTTTGTG
GTGGTGACCC ATGATCATAA ATTGGCCGCC CGTATGGATC GTCAACTGAT GATGAAGAAC
GGCTTCCTGC AATTAGCGGC GGAAACCCAA GTATGA
|
|---|
| Protein sequence | MQDVLLQVQS VSKSYHDGAV TTQVLSNVDL QVFKGEQLAI VGSSGSGKST LLHIMGTLDE
PTAGKVLLLG EDLYQVSSAR QAQIRNQDLG FIYQFHHLLP EFTALENVAM PAFIQGKDRK
LALADAKALL ERVGLGHRMT HIPAELSGGE RQRVAIARAL INKPKLVLAD EPTGNLDANS
GDAVYELIRE LAEQLGTAFV VVTHDHKLAA RMDRQLMMKN GFLQLAAETQ V
|
|---|
| |