| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2507 |
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| Symbol | |
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| ID | 5754266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 2957810 |
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| End bp | 2959060 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641288801 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001554935 |
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| Protein GI | 160875619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0346444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC CGTTAGCCTT ATCCATTGGT TGGCGTTTTT ATCGCGCCCG CCAATCCAAC
AGCTTTATTA GCTTTATTTC CTTCGCATCG ACTGCGGGCA TCGCCTTAGG CGTGGCGGTA
TTGATCATCG TTCTGTCGGC GATGAACGGT TTTGAGCGCG AGTTAGAACA TAGATTGCTT
GGCGTCGTGC CGCAGGCGGA CATAGTTGGC GTGAGTGAGC CTATCGCGAA CTGGCAGAGT
GTTGCCGAGG GAGCGCTGTT AATTGAAGGT ATTCGCGGCG CGGCGCCTTT TATCCGCATG
CAAGGTTTAG TGCAAAAGCC CGGCGGTTTT CAAGGTTTAG CCGTGGTGGG GATCGATCCA
AAAGAAGAAA TCAAGGTCTC GACACTGGCG CAATTTATGA GCGATGCCAG CTGGCAGAGT
CTAGGCCAAG ATGAGAATAA CATCGTCCTT GGGCAGAGTT TGTTGACCAA GTTGGGGCTT
GAGGTTGGCG ATACGCTGGC CTTATATGTG CAGGATCTGG ATCCAGAAGC GGCGGGCAGT
TTACGCGCGG CGAAGAGCCA TCGTTTTGTG GTGTCTGGCG CCTATAATCT TGGCGGCGAG
CTTGAGCTGA CTACGGCTTA TATTCCTATG CAGTACGCGG CGCAGATTTT GAACATGAAG
AGCGGCGTGA CTGGCGTGCG TATTAGCGTC GATAAAGTGT TTGATGCGCC CGTCAAAGTG
CGCGAGCTTG GTTATGCGCA AAAGCAGTCG GTGTATATCA GTGACTGGAC CCGTACCCAA
GGGCATTTAT ATCAAGACAT TCAGTTGGTT CGCACAGTCA TGTACTTAGT GCTTGTGCTG
GTGATTGGTG TCGCTTGCTT TAATATCGTT TCCACCTTAG TGATGGCAGT GCGGGATAAA
GCCTCTGAGA TTGCGATTTT GATGACTATG GGCCTGAGCC GCCTTGCTGT GATGGGGATT
TTCATGGTGC AGGGCGCCTT GAATGGTCTG CTTGGCTGTG GTCTTGGCGG GATTATCGGC
GTGAGTGTGG CACTGAATTT AAGTGCGATT GCCAGTACGA TGGAGCAGTT ACTCGGTATT
CAACTGCTGT CAGCCGATGT GTACTTTGTC GATTTTTTAC CGTCTGAGTT ACATGGCTCA
GATGCGGTGT TGGTGATTGT GATGGCGTTT GTGATGAGCT TAGTCGCCAC ACTCTATCCT
GCTTGGAAAG CCAGTCAGAT TGCGCCAGCG CAAGCCTTAG CGGGGAGATA A
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| Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIIVLSAMNG FERELEHRLL
GVVPQADIVG VSEPIANWQS VAEGALLIEG IRGAAPFIRM QGLVQKPGGF QGLAVVGIDP
KEEIKVSTLA QFMSDASWQS LGQDENNIVL GQSLLTKLGL EVGDTLALYV QDLDPEAAGS
LRAAKSHRFV VSGAYNLGGE LELTTAYIPM QYAAQILNMK SGVTGVRISV DKVFDAPVKV
RELGYAQKQS VYISDWTRTQ GHLYQDIQLV RTVMYLVLVL VIGVACFNIV STLVMAVRDK
ASEIAILMTM GLSRLAVMGI FMVQGALNGL LGCGLGGIIG VSVALNLSAI ASTMEQLLGI
QLLSADVYFV DFLPSELHGS DAVLVIVMAF VMSLVATLYP AWKASQIAPA QALAGR
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