Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2488 |
Symbol | |
ID | 5754247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2941977 |
End bp | 2943200 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641288782 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001554916 |
Protein GI | 160875600 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0118329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000775175 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACCCAC AATCACAACC TTCTGCCCAT AACGGCAGAC GTATACCGAA TTTAGCGCTG CTTATTCCCA TGCTTGCGGC GATTGTCGCG ATCACGCCAT TGGCCATCGA CATGTACTTA CCTGCGATGT CGACATTGGC CCTCAGTTTT CATACCGATG TCACGACAGT GCAGCAGTCC CTGAGTATCT ACTTAGCGGG TTACGCGCTG GGCATGTTAT GTTTCGGCCC CCTAGCCGAC CGCATTGGTC GTCGCCCTAT GGTGATATTG GGACTGAGTG GATTTATGCT CACCAGCTTA CTGATAGGGT TTGCGGGTCA AGTCGAAGTC TTTCTTGGAC TACGTTTTTT GCAGGCTTTT ATCGGCGCGG CTGCGACTGT GGTGGTACCG GGATACATCA AAGAAGTCTA TGGTGATAAT ACCGCCAAGG GTATGTCATA CGTGAGTTTA ATCATGATGT TAGCGCCATT ACTCGCACCT AGCATTGGCA GCGTGATCCT CGAACTCGGT GATTGGCATT TAATCTTCTT CATTCAATCC GCCTATGCCG CTACCCTGTT ATTACTGGTG CTGTTTGCGC TGAAAATGCC CAGCGATAAA GATATGGATA CCCGCAGCCA AAAATCGTTT CTTGGCGCCT ATGCGACCGT ATTTTCCCGC CCTGGCGTTA AGCTAAACAT TGCCAGCGGC GTGTTAACGT CTTTTTCATT TTTCTGTTAT CTCACCGCAT CGCCCTTCGT TTACATGGAA GTCTTTGCCT TAGATAAATC CTATTTTGCC ATCTTGTTTA GCACTAACGT CGGCGCTTTG ATGTTGGCCA ATATCATTAA TACGCGCATC GTGGGCCGTT ATGGTTCGCT ACGTATGTTG CATGTGTCGA CCTTTTTCGG GGCGATTGCT GGTGTCGGTT TATTAACCGT AAACCTGCTG GATATGAGCT ATCACTTTAC CGTGATCATG CTTATTCCTT TGATGGGTAG CCTAGGGGTG ATGTCAGTCA ATGCCGATGC GATAGTACTG ATGAAGTTCA AGCAAGAAAC GGGAACCGCA ACCGCAGTTA TTGGCACCTT AAGATTTGGC TGTGGCGCAC TGGCGGGCCC GTTATTGGCG GTGTTTTACG ATGGCACAGC CGTGCCCTTC TCTGCACTCA TGTTAGGTTC TATTGTGTTA GTCGGTATTT GCCAATTCAA CCGTCCAAAG CATCAAATAC CGCCGACGGT TTAA
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Protein sequence | MDPQSQPSAH NGRRIPNLAL LIPMLAAIVA ITPLAIDMYL PAMSTLALSF HTDVTTVQQS LSIYLAGYAL GMLCFGPLAD RIGRRPMVIL GLSGFMLTSL LIGFAGQVEV FLGLRFLQAF IGAAATVVVP GYIKEVYGDN TAKGMSYVSL IMMLAPLLAP SIGSVILELG DWHLIFFIQS AYAATLLLLV LFALKMPSDK DMDTRSQKSF LGAYATVFSR PGVKLNIASG VLTSFSFFCY LTASPFVYME VFALDKSYFA ILFSTNVGAL MLANIINTRI VGRYGSLRML HVSTFFGAIA GVGLLTVNLL DMSYHFTVIM LIPLMGSLGV MSVNADAIVL MKFKQETGTA TAVIGTLRFG CGALAGPLLA VFYDGTAVPF SALMLGSIVL VGICQFNRPK HQIPPTV
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