| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2486 |
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| Symbol | |
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| ID | 5754245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2937961 |
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| End bp | 2939319 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641288780 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001554914 |
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| Protein GI | 160875598 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.11043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000113199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGTACAA TCTGGACGCC AGACCTAACT GCTTTTTCAG GCCCGAAATA TCAGCGCTTA
GTCAGTGCGA TAGAACAAGG CATTTTGCAG AAAGTGTTAA CCCAAGGCAG TAAACTGCCC
CCGCAGCGCC GTTTAGCCGA TGCCTTAGGC ATCACTATTG GCACTGTAAC CCGCGCCTAT
GCATTGGCGG AACAAAGGGG TTACGTCGAA GCGCGCGTCG GTGATGGCAC CTATGTCAAC
GCCTCCCCAG TACCAGAGAT CGGTAACGTA CAATTGAATA TGGCGACCTG CCAGCAGCCA
CTCACAGATC AAATTAGCAC CCTGAGTGAT TGCCTCAGCC AATTAGCAAA AGACCCGACA
AAGCTCAGCC AGTTACTGGG TTATCGCGCC AGTCCATTAG ATCAACATCA ACAAGTGTTT
CACCAATGGC TTAACCAACG CGGCATACAA CAAACGCCTG AGCAACTGAT CTTTGCCCAT
GGCGGCCAGC AAGCGATTTT TGCCTGTTTG AGTGCATTTT TATCGACGGG CGATGTGCTG
CTGCACGAAC AATACAGTTA TCCAGGCGTG AGAATTTGCG CTAAGCAACT GGGCGTTACC
AGCATTGGAG TGCCCCTCAC CCATGAAGGT GTGGATCTCG CCCGCTTTGA GGCGTTAGTG
CAAATCCATC ATCCCAAGTT AGTCTATCTA ACCCTGAATA ATCAAAATCC TACCTGTATT
CAATACAGTG AGTCGCAGCG ACAAAAACTC CTCGAATTGG CCGAGCAGTA TCAGTTTTAT
ATCATTGAAG ATGATGTGAA TTATTGTTTA CCCGAAGAGT GGCATTCGCC CCTGTGGCAA
TTAGCAAAAC AGCTGGCTAT CCCACGGGTG ATTTATATTT CTAGCCTGTC CAAATTGTTT
TCTGGCGGCC TAAGGCAAGG TTTTATTCTG GTGCCTGAAC CACTTATCGC CCAAGTGCGA
CTCGCGATTC ATAGCCAATG CTGGATGGTA TCGCCGCTGA ACATTGAAAT AGCCTGTCAG
TTGATTAAGA AAGGCCAAAT CACTGCCGAT CGCGATAGCA TAGTTCGCCA ACGCCAACAT
CTCTGTATCG CCATGGGCGA ACGACTGGGA TTAACCCAAA CTTGGCGAGG ACTGAACGGT
TGGCTACAAC TGCCAGAAGA TATCAAGGCC CATCATCTCG TCACTGCGCT AGCTGCCAAA
GGCATTTTGA TCCGTAATGG AGATGACTTT AATTGCCATG AAAATTTTAT TCGCTTGAGC
CTTGGCGGCG CCGAAAACGA CAGTCAATTT CAACATGCGA TTGACTGTAT CGAGGCGACG
ATTCACTCCC TGGTACAAAA TGCCTATTCA GTGGTGTAA
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| Protein sequence | MGTIWTPDLT AFSGPKYQRL VSAIEQGILQ KVLTQGSKLP PQRRLADALG ITIGTVTRAY
ALAEQRGYVE ARVGDGTYVN ASPVPEIGNV QLNMATCQQP LTDQISTLSD CLSQLAKDPT
KLSQLLGYRA SPLDQHQQVF HQWLNQRGIQ QTPEQLIFAH GGQQAIFACL SAFLSTGDVL
LHEQYSYPGV RICAKQLGVT SIGVPLTHEG VDLARFEALV QIHHPKLVYL TLNNQNPTCI
QYSESQRQKL LELAEQYQFY IIEDDVNYCL PEEWHSPLWQ LAKQLAIPRV IYISSLSKLF
SGGLRQGFIL VPEPLIAQVR LAIHSQCWMV SPLNIEIACQ LIKKGQITAD RDSIVRQRQH
LCIAMGERLG LTQTWRGLNG WLQLPEDIKA HHLVTALAAK GILIRNGDDF NCHENFIRLS
LGGAENDSQF QHAIDCIEAT IHSLVQNAYS VV
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