| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2478 |
|---|
| Symbol | |
|---|
| ID | 5754237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2930662 |
|---|
| End bp | 2931399 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641288772 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_001554906 |
|---|
| Protein GI | 160875590 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000979524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000842589 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGA CTCTGTTAAT CCCGGCTCGT TACGGTTCAA GCCGCTTCCC GGGCAAACCC
TTAGCCCCGA TTAACGGCAA GCCAATGATC CAACACGTGT ATGAACGCGC GTCGTTAGCC
AAAGGCCTCA CCAATATTTA TGTCGCTACC GATGATGACC GCATTAAAGC GGCCGTTGAA
GGTTTTGGCG GCAAAGTGGT CATGACCAGC CCAGATGCAG CCTCGGGCAC AGATCGTATC
AATGATGCAA TAAACCAACT GGGCCTGAAA GATGACGACT TAGTGATCAA CCTACAGGGT
GATCAACCTC TTATTGACCC AACCTCTATC GAGCAAGTCA TCAGCCTCTT CGAGCGTCAC
CCAGGTGAGT TTGAAATGGC CACCTTAGGC TTTGAAATCG TCAATAAAGC CGAGCTTGAC
GATCCTATGC ATGTGAAGAT GGTGTTCGAT AACAACAACT ATGCCTTGTA TTTCTCTCGT
TCGCGTATTC CTTTTGGCCG CGACACCCAA GATTACCCCG TTTATAAGCA CTTAGGTGTG
TATGCTTATA CCCGCAAATT CGTTCAGGCC TTCGCCGCCC TACCATTAGG TCGTCTAGAA
GATCTGGAAA AACTCGAGCA ATTGCGCGCA TTAGAGTACG GCCATAAAAT CAAAATCGCC
ATTAGCGCCT TTGATTCTAT TGAAGTTGAT ACGCCAGAAG ACATTCGTAA ATGTGAGCAA
CGTTTAGCGG TTGATTAA
|
|---|
| Protein sequence | MNVTLLIPAR YGSSRFPGKP LAPINGKPMI QHVYERASLA KGLTNIYVAT DDDRIKAAVE
GFGGKVVMTS PDAASGTDRI NDAINQLGLK DDDLVINLQG DQPLIDPTSI EQVISLFERH
PGEFEMATLG FEIVNKAELD DPMHVKMVFD NNNYALYFSR SRIPFGRDTQ DYPVYKHLGV
YAYTRKFVQA FAALPLGRLE DLEKLEQLRA LEYGHKIKIA ISAFDSIEVD TPEDIRKCEQ
RLAVD
|
|---|
| |