| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2470 |
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| Symbol | |
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| ID | 5754229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2922422 |
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| End bp | 2923564 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641288764 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001554898 |
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| Protein GI | 160875582 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00847211 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0846524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCCAG CCGACGATTA TCCTGTAACT GAACTGACAA AAGCGCTGAT CGCCCGCCCT
TCGGTGACGC CGCTTGATGA AGGCTGTCAA ACCTTAATGG CTGAAAGACT CAGCGCCATC
GGCTTTAATA TTGAACCTAT GGTATTTGAA GACACCACCA ATATGTGGGC TCGCCGTGGC
AATGAAGGTC CGGTCTTTTG TTTTGCCGGC CACACAGATG TTGTGCCAAC GGGTGATGTG
AGCCGCTGGC ACACGCCGCC TTTTGTGCCC ACCATCATTG ATGGCTACTT ATATGGCCGC
GGCGCAGCGG ACATGAAAGG CTCACTGGCG GCGATGATCA TTGCCACCGA ACGCTTTGTG
GCTAAACATC CCGATCATCA TGGCTCTATC GCCTTTTTGA TCACCAGTGA TGAAGAAGGT
CCGTTCATCA ACGGCACGAC GCGAGTCATT GATACCTTAG AAGCGCGCAA CGAGAAGATC
ACCTGGGCAT TAGTCGGCGA ACCCTCATCA ACCCTAAAGC TGGGTGATGT GGTCAAAAAT
GGTCGCCGCG GCAGTTTAAC CGGCAACTTA ACCGTGAAAG GCATTCAAGG CCACGTGGCC
TATCCACACC TTGCCGATAA TCCAATCCAC AAAGCCGCGC CTTTCTTAGC CGAGCTGAGT
CAGATGCACT GGGATAATGG CAATGAGTTC TTTCCGCCCA CCAGCTTCCA AATCGCCAAT
ATTAATGGCG GCACCGGCGC ATCGAATGTG ATCCCCGGCG CACTGGACGT GATGTTTAAC
TTCCGTTACT CCACCGAAGT GAGCGCCGAC ATCTTGATTG AGCGGGTTGA AGCCTTATTG
AAAGCCCATG AGCTAGATTA CGATATCAGC TGGATTTTCA ATGGCCTGCC ATTTTTAACC
GGCGATGGCC CACTGCTTGA CGCGACCCGT ATTGCTATTC GCCAAGTCAC AGGCTATGAG
ACAGATCCAC AAACCACAGG CGGCACATCG GACGGACGCT TTATCGCGCC AACGGGTGCC
AAAGTGTTAG AGCTTGGCCC AGTGAACGCT ACCATTCATA AAGTGAATGA ATGCGTTAAA
GTGGATGACC TTGAGCAGCT AGCCCTGTGT TATGAAGTGA TTTTGGAACA ACTATTGTGC
TAA
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| Protein sequence | MMPADDYPVT ELTKALIARP SVTPLDEGCQ TLMAERLSAI GFNIEPMVFE DTTNMWARRG
NEGPVFCFAG HTDVVPTGDV SRWHTPPFVP TIIDGYLYGR GAADMKGSLA AMIIATERFV
AKHPDHHGSI AFLITSDEEG PFINGTTRVI DTLEARNEKI TWALVGEPSS TLKLGDVVKN
GRRGSLTGNL TVKGIQGHVA YPHLADNPIH KAAPFLAELS QMHWDNGNEF FPPTSFQIAN
INGGTGASNV IPGALDVMFN FRYSTEVSAD ILIERVEALL KAHELDYDIS WIFNGLPFLT
GDGPLLDATR IAIRQVTGYE TDPQTTGGTS DGRFIAPTGA KVLELGPVNA TIHKVNECVK
VDDLEQLALC YEVILEQLLC
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