Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2455 |
Symbol | |
ID | 5754214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2905235 |
End bp | 2906077 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288749 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001554883 |
Protein GI | 160875567 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.157976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC CTGTTCCTAA AGCGACATTG TTAACGCCCA GTGACGTGGC GTTTATCACA GATGCCAATC GACCTGTGCT GACCCATACT CGCAATATGG CGGCGGAAGC GGGCATTGAG CCTCATTCAC ATCCGCGGGG GCAGCTACTT TGGGCCGCCA AAGGCTTGTT ACGTGTCCGC AGTGAAAATG CCGTCTGGGT GGTACCTTCA ACCCATGCGG TGTGGATCCC CTGCAATTTG CCCCATCAAG TGAACAGCGA AACCCACGCC CACACTCGCA ATATCTATAT TGATCCTAGC TATGATGTTA GGCCACAGGA TACAAAAGTG GTGATGGTGA CGATGACAGC GCTGATGCGC GAACTGGTGC TCAAACTCTG TGAGAGTTCA CACCTTTTAG GCAGTGGACA ACTGCATCGG CTGGGTTTGG TTGCCATTGA TGAGCTCGAA ACTCTGGACA GCCTAGATGC TCATTTACCC GCAGGCTCAG ATCCAAGACT CAGCCGCTTG ATCCAAAAGT TGATCCGGCA CCCAACAGTG AATTACACCC TGACCGAGTT AGCCGAAATG GGCGGCGCGA GTGTGAGAAC GATTGAACGA CTATTCAAAG CTGAAACTGG GCTCACTTAT CGACAATGGC GGCAAAGGTT TCGTTTGTTA AATTCGCTTG AAAGCTTAAG CCAAGGAGAG AGCACGACTA GGGTGGCACA TAGTCTAGGT TATCTGAGCG TCAGCAGTTT CAGTGCGGCT TTTAAAATGC AATTTGGTTG CACGCCGCAA GATTATCCGC AGCATAAGCT GATGAAAAAC AGGAAAAATC AGTTTACTCC CGCGCAAGAA TAA
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Protein sequence | MSKPVPKATL LTPSDVAFIT DANRPVLTHT RNMAAEAGIE PHSHPRGQLL WAAKGLLRVR SENAVWVVPS THAVWIPCNL PHQVNSETHA HTRNIYIDPS YDVRPQDTKV VMVTMTALMR ELVLKLCESS HLLGSGQLHR LGLVAIDELE TLDSLDAHLP AGSDPRLSRL IQKLIRHPTV NYTLTELAEM GGASVRTIER LFKAETGLTY RQWRQRFRLL NSLESLSQGE STTRVAHSLG YLSVSSFSAA FKMQFGCTPQ DYPQHKLMKN RKNQFTPAQE
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