| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2434 |
|---|
| Symbol | thiH |
|---|
| ID | 5754193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2878836 |
|---|
| End bp | 2879951 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641288728 |
|---|
| Product | thiamine biosynthesis protein ThiH |
|---|
| Protein accession | YP_001554862 |
|---|
| Protein GI | 160875546 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.360626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTG TAGCGGAATT TGCCAACATC CCACGGGATA AACTGTTACT CGATTTGTAT
TCTTGCACTG CCCAAGATGT TGAGCGGGCG CTGGTGAGTC CAGCAGGGGA TTTACGTAGC
TTATTGGCCT TGCTATCACC TGCGGCGGAA CCTTATATCG AAACCATGGC GCAGCACTCT
GCGGCGCTAA CGCGGCAGCG ATTTGGCGCG AATCTGGGCA TGTATTTACC GCTATACGTC
TCGAATCTGT GCGCTAATGA GTGTGATTAC TGTGGCTTTA GCATGAGTAA CAAACTCAAA
CGCAAGACCT TGAATGAGCA GGAGTTGATG GCCGAAATGG CCATTATCAA AGATAGGGGC
TTCGATTCTA TTTTACTGGT GTCAGGTGAG CATGAAACTA AGGTCGGCAT CGATTATTTC
AAGCAAATGT TGCCGCTGGT AAAGCAGCAA TTTAGCCATT TGGCGATGGA GGTCCAGCCC
ATGAGTGAGG ACCATTATTG CCAGTTAGTC GCGCTAGGTT TAGATGCTGT GATGATTTAT
CAGGAGACCT ATCAGCCCGA AACTTATGCT CGTCACCATT CTCGAGGGAA AAAAATGGAT
TTTGCCTATC GTTTAGCAAC ACCGGACAGA GTTGCGGCGG CGGGCGTCGA TAAAATTGGT
CTTGGGGTAT TACTCGGGCT GGATGATTGG CGTTTAGATG CGTTAATGAT GGGATATCAT
CTCGACTATT TAGAGCGACG CTATTGGCGC ACCCGCTTTA GTATTTCGCT ACCAAGGTTA
CGACCTTGTA CTGGCGGGAT CACCCCAAAA GTCATGCTAT CGGATCTAGG TTTAGTGCAA
ATGATTTGTG CATTTAGACT TTTTAATCAA CAGCTTAACA TCAGCATGTC GACAAGGGAA
AGCCCTGAGC TGAGGGATAA TCTTTTGCCA CTTGGGATCA CTCAAATCAG TGCGGGCAGT
TCGACACAAC CGGGCGGCTA TCAAGCGCCT GACAGTCAAC TCGATCAATT TGAGATAAGC
GATGATCGCA GTGTCGAGCA AGTTATCGAA CAGATGCAAC GGCAGGGTTT TAATCCCGTA
TTTAAGGATT GGGAAGCTAA TTGGATCACA GGATAA
|
|---|
| Protein sequence | MSFVAEFANI PRDKLLLDLY SCTAQDVERA LVSPAGDLRS LLALLSPAAE PYIETMAQHS
AALTRQRFGA NLGMYLPLYV SNLCANECDY CGFSMSNKLK RKTLNEQELM AEMAIIKDRG
FDSILLVSGE HETKVGIDYF KQMLPLVKQQ FSHLAMEVQP MSEDHYCQLV ALGLDAVMIY
QETYQPETYA RHHSRGKKMD FAYRLATPDR VAAAGVDKIG LGVLLGLDDW RLDALMMGYH
LDYLERRYWR TRFSISLPRL RPCTGGITPK VMLSDLGLVQ MICAFRLFNQ QLNISMSTRE
SPELRDNLLP LGITQISAGS STQPGGYQAP DSQLDQFEIS DDRSVEQVIE QMQRQGFNPV
FKDWEANWIT G
|
|---|
| |