Gene Sbal195_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2406 
Symbol 
ID5754165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2840584 
End bp2841255 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content55% 
IMG OID641288700 
ProductHAD family hydrolase 
Protein accessionYP_001554834 
Protein GI160875518 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0211635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000117739 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTCTGG CACAGATCCA AGGCGTACTG TTCGATCTCG ACGGCACCTT AGCCGATACC 
GCGCCGGATC TGGTGCAGGC CCTTAATTTA AGTCTTCAGG ACGTCGGCAT CGCCGCGCAG
CCGTTAGCGG CCATGCGCTA CGCCGCATCC CACGGCAGTT TTGCCTTAGT CGATGCGGCG
ATCCCCAATG CAGCGGATGA TCTTCGTACT CAAGTTCAGC AAGGGCTGCT CGCCCACTAT
CAGCGCATTA ATGGCGATCA CTGTGCGCTA TTCACAGGCA TTGCAGCATT ACTCGACTGG
CTCGAGTTAA CGCAGCTGCC GTTTGGGGTG ATCACCAACA AGCCAGCCCG CTTTACCCGT
CCCTTATTGC GAAAACTGAA TTTACACTTA CGTATGCCCG TTATCATCAG TGGCGATTCA
ACCAAACACC CAAAACCCCA CACAGCACCT ATGTTGTTAG GGGCTCAGCA ACTGAACTGC
GCTCCAGAGC ACATTTTGTA TCTTGGGGAT GCCGAGCGGG ATTTGTTAGC AGCTAAGGCG
GCGGGCATGT TAGGCGGCGT TGCCCTATGG GGTTATCTGG GTGTCAACGA CAAGCCATCG
CAATGGCCAG CTCACGCACA CTTTGCCAGC CCAACTGAGC TACATCAGGC ATTAGTCGAC
GCATTGGCCT AG
 
Protein sequence
MSLAQIQGVL FDLDGTLADT APDLVQALNL SLQDVGIAAQ PLAAMRYAAS HGSFALVDAA 
IPNAADDLRT QVQQGLLAHY QRINGDHCAL FTGIAALLDW LELTQLPFGV ITNKPARFTR
PLLRKLNLHL RMPVIISGDS TKHPKPHTAP MLLGAQQLNC APEHILYLGD AERDLLAAKA
AGMLGGVALW GYLGVNDKPS QWPAHAHFAS PTELHQALVD ALA