Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2396 |
Symbol | rpsA |
ID | 5754155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2825870 |
End bp | 2827537 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641288690 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_001554824 |
Protein GI | 160875508 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000546021 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000133254 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTC AAACTCTGGA ATTCCGTCCA GGTTCTATCG TTCGTGGTAC TGTTGTATCA ATCAAAAACG GTATGGTACT GGTTGACGCG GGTCTGAAGT CTGAAAGCCC AATCCCAGCT GAACAATTCA AAAACGCTCA AGGTGTTTTA GAAATCGCTG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA CGGCTTCGGT GAGACTCAAC TGTCTCGCGA AAAAGCGAAA CGTCATGAAG CTTGGATCGT TCTGGAAAAA GCTTATGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAAGTTAA AGGCGGTTTC ACTGTTGAAT TAAACGGTAT CCGTGCCTTC TTACCAGGTT CTCTAGTTGA CGTGCGCCCA GTTCGCGACA CCGCTCACTT AGAGTACAAA GAATTAGAAT TCAAAGTTAT CAAGCTAGAC CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCAGA AAGCAGCGCT GAGCGTGATG CACTGTTAGA AAACCTGCAA GAAGGTCAAG CAGTTAAGGG TATCGTTAAG AACCTGACTG ACTACGGTGC ATTCGTAGAT TTAGGTGGTG TTGACGGTCT GCTACATATC ACAGATATGG CGTGGAAACG TGTTAAACAT CCATCAGAAA TCGTCAATGT TGGCGATGAA ATCAACGTTA AAGTACTGAA GTACGATCGT GAGCGCACTC GTGTGTCTCT AGGTCTGAAA CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAACGCT ACCCAGAAAA CACACGTTTA ACTGGTCGCG TTACTAACCT AACTGACTAC GGTTGCTTCG TAGAAATCGA AGAAGGCGTT GAAGGTCTGG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATTCA CCCATCTAAA GTTGTTAACT TAGGTGATGA AGTTGAAGTT CTGGTTCTGG ACATCGATGA AGAGCGTCGT CGTATTTCTC TTGGTCTGAA ACAATGTAAG ACCAATCCAT GGGATGACTT CGCAACTCGT TACAACAAAG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTT ATCGGTCTTG ACGGCGGTAT CGATGGTCTA GTTCACCTGT CTGACATTTC TTGGAACGGT ACTGGCGAAG ACGCAGTTTC TGAATACAAG AAAGGCGATG AAATCCATGC AGTGGTTCTG TCTGTAGATC CAGAGCGTGA GCGCATCAGC TTAGGTGTTA AGCAAACTGA AGATGATCCA TTCAACGCAT ACTTGGCTGA CAAGAAGAAA GGTACTATCG TAAACGGTAC TGTTTCTGCT GTTGATGCTA AAGGTGTAAC TGTTGAACTG GCTGACACTG TTGAAGGTTA CATCCGTGTA GCTGACATTT CACGTGAGCG TATCGAAGAT GCATCTACTG TCTATAATGT AGGTGATGCA ATCGAAGCTA AGTTCATGGG TGTTGACCGT AAGAACCGCT CTATCAGCCT GTCAATCAAA GCGAAAGACG AAGCTGAAGA GAAAGAAGTA ATGGCGACTC TGAACAAACA AGATGACGCT GTTATTAGCA ATGCAATGGC TGAAGCGTTT AAAGCAGCTC GTAAATAA
|
Protein sequence | MTESFADLFE QSLQTLEFRP GSIVRGTVVS IKNGMVLVDA GLKSESPIPA EQFKNAQGVL EIAVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF TVELNGIRAF LPGSLVDVRP VRDTAHLEYK ELEFKVIKLD QKRNNVVVSR RAVIESESSA ERDALLENLQ EGQAVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTRL TGRVTNLTDY GCFVEIEEGV EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFATR YNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVSEYK KGDEIHAVVL SVDPERERIS LGVKQTEDDP FNAYLADKKK GTIVNGTVSA VDAKGVTVEL ADTVEGYIRV ADISRERIED ASTVYNVGDA IEAKFMGVDR KNRSISLSIK AKDEAEEKEV MATLNKQDDA VISNAMAEAF KAARK
|
| |