Gene Sbal195_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2377 
Symbol 
ID5754136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2803688 
End bp2805676 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content45% 
IMG OID641288671 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_001554805 
Protein GI160875489 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase 
TIGRFAM ID[TIGR00614] ATP-dependent DNA helicase, RecQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0320482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0846524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATC CCATTCCAGA AACCAATCCA TACATTAGTT TGTTGCAGCA GGATTTTGGG 
TTTTCTGAAT TTCGCCCTGG CCAAGCGCAA ACGATAACAC AACTGTTGGC GGGGAAGTCG
AGTTTAGCGA TTTTTCCGAC GGGTTCCGGT AAATCCCTTT GTTATCAATT TACAGCATTG
CAGTTACCCC ATTTGAGTTT AGTGATTTCG CCTTTACTCG CCTTGATGAA AGATCAGCTG
GAATTTTTAC AATCTAAGGG AATTTATGCG GCCAGCATAG ATTCAACCTT AAGCGCCGAG
CAGAGTCAGC AAGTGATGGC AGATGCGCGC TCTGGCAAGC TGAAAATCTT GATGGTGTCG
GTGGAACGTT TCAAAAATGA ACGTTTTCGG CAATTTATTC AATCGGTTCC GCTGTCCATG
CTGGTCGTCG ATGAGGCGCA TTGTATTTCA GAGTGGGGCC ATAATTTTCG GCCCGATTAT
CTTAAATTGC CCGATTATCG GCGCGAGCTT GAGATCCCAT TGGTACTGTT ATTGACGGCC
ACAGCAACAC GTAAAGTGAA ACTGGATATG GCCAAGCGCT TTGATATTGC GCCTGAACAC
ATAGTGCAAA CGGGATTTTA TCGACCCAAT TTAGATTTGA CTGTTCTGCC TTTATCAACG
CAAGAGAAGA ATACCTTACT GGTTCAGCAG ATTGCATCAT TCTCAGGTGC CGGCATTGTG
TATGTAACTT TGCAGCAAAC CGCCGAAACG GTCGCACGAC TTTTGAGCCA ACAAGGTATA
GTCGCCAGTG CCTATCATGC TGGATTTGAA GATGAAAAAC GTCAACAAAT TCAAAATGAT
TTTATGCAGG ATAAGCTGCA AGTGGTAGTG GCAACCATCG CTTTTGGCAT GGGAATCGAT
AAGAGCAATA TTCGTTTTGT GATCCACTAC GATTTGCCTA AATCCATTGA AAACTACAGT
CAAGAAATCG GCAGAGCAGG GCGTGATGGT GCGTTATCCC ATTGTGTCAC TTTGGCCAAT
CTTGACGGGC TCAATACCGT TGAGAATTTT GTGTATGGCG ATACGCCGGA GCGAGAAGGT
ATAGCACAAG TTATTGAGGC TATTCGACTT GAACAAGATT CCGGTCAGTG GGAATGTCAG
CTCAATGGCG TCTCGACGGC GAGTAATATT CGCCAGTTAC CGTTAAAAAC GTTACTCGTT
CAATTGGAAA TTTTAGGTGT AGTTAAGCCG TTATTCGCTT ACTACGCTGA CGTTAATTAC
AAGTTTTTGG TCGACAAACA CGCCATTCTC AGCCGATTTA ATCCCGAGCG GCAGGCGTTT
TTGACGCAGA TTTTTAATCA TACGCAGATG AAGAAAATAT GGGGCGCGTT AGATTTTGAT
GCCTTGTACA GTGCAACGGG TCATGAGCGC AGCCGCGTGT TAGCCGCGCT GGAATATTTA
GCTGAACATC AGTTGATTGA ATTAGAAACT AAACGAATTA CCGATGTGTA TCGGGTGGAT
GTTGCCGCAT TAGCGCGTCC CGAACTCATC GATGAGCTGT ACCATTATTT TATCGATAAA
GAGCAGAAAG AAATTGCGCG AATCGCGCAG TTAGTCCGCT TTTTTGAACT TGAGACGTGC
TTAAGCCACA ATTTATCCCG TTATTTTGAT GATAATGAGA CGCCAGCGGT CTGCGGTCAT
TGCAGTGTTT GCCGTGGCAA TATTGCTAAG TTGCGCTATT CGACGGAACC AACTTGGCCG
ACAGATCAGC AGATATTGGC TGATTTGCGT GAGTTGAAAT ATCATTTAAC GGCTAAAGGC
ATTGAGGCTT TGTCACTCGA TACCTATTGT CGTTGCCTCG CAGGCATGTC GGTGCCTTTG
GTGAGTCGTT TTCAAGTGCG TAAGTTAAGT GGCTTCGGCC GCTGTGAAAA ATTGAGATAT
GCTGAAATTA AACAGAAAGT TGAGTCACTG TTGTCGCAAC TAGATGATAA AAGAGTTGAA
CATGAATAA
 
Protein sequence
MFNPIPETNP YISLLQQDFG FSEFRPGQAQ TITQLLAGKS SLAIFPTGSG KSLCYQFTAL 
QLPHLSLVIS PLLALMKDQL EFLQSKGIYA ASIDSTLSAE QSQQVMADAR SGKLKILMVS
VERFKNERFR QFIQSVPLSM LVVDEAHCIS EWGHNFRPDY LKLPDYRREL EIPLVLLLTA
TATRKVKLDM AKRFDIAPEH IVQTGFYRPN LDLTVLPLST QEKNTLLVQQ IASFSGAGIV
YVTLQQTAET VARLLSQQGI VASAYHAGFE DEKRQQIQND FMQDKLQVVV ATIAFGMGID
KSNIRFVIHY DLPKSIENYS QEIGRAGRDG ALSHCVTLAN LDGLNTVENF VYGDTPEREG
IAQVIEAIRL EQDSGQWECQ LNGVSTASNI RQLPLKTLLV QLEILGVVKP LFAYYADVNY
KFLVDKHAIL SRFNPERQAF LTQIFNHTQM KKIWGALDFD ALYSATGHER SRVLAALEYL
AEHQLIELET KRITDVYRVD VAALARPELI DELYHYFIDK EQKEIARIAQ LVRFFELETC
LSHNLSRYFD DNETPAVCGH CSVCRGNIAK LRYSTEPTWP TDQQILADLR ELKYHLTAKG
IEALSLDTYC RCLAGMSVPL VSRFQVRKLS GFGRCEKLRY AEIKQKVESL LSQLDDKRVE
HE