Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2377 |
Symbol | |
ID | 5754136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2803688 |
End bp | 2805676 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641288671 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001554805 |
Protein GI | 160875489 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0320482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0846524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAATC CCATTCCAGA AACCAATCCA TACATTAGTT TGTTGCAGCA GGATTTTGGG TTTTCTGAAT TTCGCCCTGG CCAAGCGCAA ACGATAACAC AACTGTTGGC GGGGAAGTCG AGTTTAGCGA TTTTTCCGAC GGGTTCCGGT AAATCCCTTT GTTATCAATT TACAGCATTG CAGTTACCCC ATTTGAGTTT AGTGATTTCG CCTTTACTCG CCTTGATGAA AGATCAGCTG GAATTTTTAC AATCTAAGGG AATTTATGCG GCCAGCATAG ATTCAACCTT AAGCGCCGAG CAGAGTCAGC AAGTGATGGC AGATGCGCGC TCTGGCAAGC TGAAAATCTT GATGGTGTCG GTGGAACGTT TCAAAAATGA ACGTTTTCGG CAATTTATTC AATCGGTTCC GCTGTCCATG CTGGTCGTCG ATGAGGCGCA TTGTATTTCA GAGTGGGGCC ATAATTTTCG GCCCGATTAT CTTAAATTGC CCGATTATCG GCGCGAGCTT GAGATCCCAT TGGTACTGTT ATTGACGGCC ACAGCAACAC GTAAAGTGAA ACTGGATATG GCCAAGCGCT TTGATATTGC GCCTGAACAC ATAGTGCAAA CGGGATTTTA TCGACCCAAT TTAGATTTGA CTGTTCTGCC TTTATCAACG CAAGAGAAGA ATACCTTACT GGTTCAGCAG ATTGCATCAT TCTCAGGTGC CGGCATTGTG TATGTAACTT TGCAGCAAAC CGCCGAAACG GTCGCACGAC TTTTGAGCCA ACAAGGTATA GTCGCCAGTG CCTATCATGC TGGATTTGAA GATGAAAAAC GTCAACAAAT TCAAAATGAT TTTATGCAGG ATAAGCTGCA AGTGGTAGTG GCAACCATCG CTTTTGGCAT GGGAATCGAT AAGAGCAATA TTCGTTTTGT GATCCACTAC GATTTGCCTA AATCCATTGA AAACTACAGT CAAGAAATCG GCAGAGCAGG GCGTGATGGT GCGTTATCCC ATTGTGTCAC TTTGGCCAAT CTTGACGGGC TCAATACCGT TGAGAATTTT GTGTATGGCG ATACGCCGGA GCGAGAAGGT ATAGCACAAG TTATTGAGGC TATTCGACTT GAACAAGATT CCGGTCAGTG GGAATGTCAG CTCAATGGCG TCTCGACGGC GAGTAATATT CGCCAGTTAC CGTTAAAAAC GTTACTCGTT CAATTGGAAA TTTTAGGTGT AGTTAAGCCG TTATTCGCTT ACTACGCTGA CGTTAATTAC AAGTTTTTGG TCGACAAACA CGCCATTCTC AGCCGATTTA ATCCCGAGCG GCAGGCGTTT TTGACGCAGA TTTTTAATCA TACGCAGATG AAGAAAATAT GGGGCGCGTT AGATTTTGAT GCCTTGTACA GTGCAACGGG TCATGAGCGC AGCCGCGTGT TAGCCGCGCT GGAATATTTA GCTGAACATC AGTTGATTGA ATTAGAAACT AAACGAATTA CCGATGTGTA TCGGGTGGAT GTTGCCGCAT TAGCGCGTCC CGAACTCATC GATGAGCTGT ACCATTATTT TATCGATAAA GAGCAGAAAG AAATTGCGCG AATCGCGCAG TTAGTCCGCT TTTTTGAACT TGAGACGTGC TTAAGCCACA ATTTATCCCG TTATTTTGAT GATAATGAGA CGCCAGCGGT CTGCGGTCAT TGCAGTGTTT GCCGTGGCAA TATTGCTAAG TTGCGCTATT CGACGGAACC AACTTGGCCG ACAGATCAGC AGATATTGGC TGATTTGCGT GAGTTGAAAT ATCATTTAAC GGCTAAAGGC ATTGAGGCTT TGTCACTCGA TACCTATTGT CGTTGCCTCG CAGGCATGTC GGTGCCTTTG GTGAGTCGTT TTCAAGTGCG TAAGTTAAGT GGCTTCGGCC GCTGTGAAAA ATTGAGATAT GCTGAAATTA AACAGAAAGT TGAGTCACTG TTGTCGCAAC TAGATGATAA AAGAGTTGAA CATGAATAA
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Protein sequence | MFNPIPETNP YISLLQQDFG FSEFRPGQAQ TITQLLAGKS SLAIFPTGSG KSLCYQFTAL QLPHLSLVIS PLLALMKDQL EFLQSKGIYA ASIDSTLSAE QSQQVMADAR SGKLKILMVS VERFKNERFR QFIQSVPLSM LVVDEAHCIS EWGHNFRPDY LKLPDYRREL EIPLVLLLTA TATRKVKLDM AKRFDIAPEH IVQTGFYRPN LDLTVLPLST QEKNTLLVQQ IASFSGAGIV YVTLQQTAET VARLLSQQGI VASAYHAGFE DEKRQQIQND FMQDKLQVVV ATIAFGMGID KSNIRFVIHY DLPKSIENYS QEIGRAGRDG ALSHCVTLAN LDGLNTVENF VYGDTPEREG IAQVIEAIRL EQDSGQWECQ LNGVSTASNI RQLPLKTLLV QLEILGVVKP LFAYYADVNY KFLVDKHAIL SRFNPERQAF LTQIFNHTQM KKIWGALDFD ALYSATGHER SRVLAALEYL AEHQLIELET KRITDVYRVD VAALARPELI DELYHYFIDK EQKEIARIAQ LVRFFELETC LSHNLSRYFD DNETPAVCGH CSVCRGNIAK LRYSTEPTWP TDQQILADLR ELKYHLTAKG IEALSLDTYC RCLAGMSVPL VSRFQVRKLS GFGRCEKLRY AEIKQKVESL LSQLDDKRVE HE
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