| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2374 |
|---|
| Symbol | |
|---|
| ID | 5754133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2800838 |
|---|
| End bp | 2802139 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641288668 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001554802 |
|---|
| Protein GI | 160875486 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00210779 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.273688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA CTACAGCCGA GCAAGCGACA GGGCATCAAG CTTCTGCCCA CCGCCAAGGG
CACTCACTCA CCCAATGGCA ACACTCACAT GAGTTTTCGA ATCAGAACCG CGATGGCGAA
AAAAACACAC GCTATGTACT GTATTTAACT GTGATCACTA TGATGGCCGA AATTGCTGCC
GGAACCATAT ACGGTTCTAT GGCATTGCTC GCCGACGGTT GGCACATGGG CACCCATGCC
GCGGCCTTTA TGATCACCCT GTTTGCCTAT TCCTATGCTC GTAAACACGC TAACGATCCC
GCCTTTGCCT TTGGCACAGG TAAGGTCAGT GTGCTTGGCG GTTACACCAG TGCAATAGCC
TTAGGTTTAG TGGCATTGGT GATGTTGATT GAATCGGGAA TGCGGCTGAT TAGTCCTGAG
CAAATTCATT TCAACGAAGC TATTTTTGTG GCCGTTATTG GTTTAAGCGT CAATATACTG
AGTGTATTTT TACTAAAAGA TCATCATACC CACGACCATG GGCATCACCA CGGGCATGGA
CATGATCATA GTCACGACCA TGATCATGAA GACGAACATG CTCACGCGCA TCATAACAGC
CAAGCACACA CCCATGACGA TCATGCACAT ACAGCGCATT CACATGATGT GGATCTGCAC
CTGCACCATG ACTCACATGC ACACGATGAA AGTCATCATG ATCATAGTCA TTGCCAACAT
GAACAGGATC ATCAACATAG TGCTGAGCAT GAGCATGAGC ATGAGCATGA GCATGAGCAT
GAGCATGAGC ATGAGCATGA GCATGAGCAT GAGCATGAGC ATGAGCACAA GAGCCAGAAG
GCCCACGGTA GCCATGATCA CAACCTACGC GCGGCCTATT TTCACGTACT AGCCGATGCG
TTAACGTCAG TGCTGGCCAT CGCTGCCTTG TTGTTTGGTA AATACATGGG ACTAACTTGG
CTCGACCCGA TTATGGGGAT TGTCGGCGCT GTGATTATCA GCCGTTGGTC TTGGGGACTT
ATTCAGCAAA CCAGTCCTAT TTTACTGGAC GGTGGCGTTA AAGCGTCATT GCAACGTAAA
GTCACACAAA CCATTGAAGC TGTAACGGAT CATCAAGTGG CCGATTTACA TCTTTGGCGA
GTGAGCGCCG ATCACCATGC TATTATGGTG TCCATCGTGT CCCATTCACC AAAAGATGTC
AGTTATTTTA ATCAGTTACT GTCACAATTT CCTGAGTTGG CCCATATCAC CATCGAACTC
CATACTTGCC GTCAGCGCGA GTGTATGGCT AAGGAAGCCT AA
|
|---|
| Protein sequence | MKSTTAEQAT GHQASAHRQG HSLTQWQHSH EFSNQNRDGE KNTRYVLYLT VITMMAEIAA
GTIYGSMALL ADGWHMGTHA AAFMITLFAY SYARKHANDP AFAFGTGKVS VLGGYTSAIA
LGLVALVMLI ESGMRLISPE QIHFNEAIFV AVIGLSVNIL SVFLLKDHHT HDHGHHHGHG
HDHSHDHDHE DEHAHAHHNS QAHTHDDHAH TAHSHDVDLH LHHDSHAHDE SHHDHSHCQH
EQDHQHSAEH EHEHEHEHEH EHEHEHEHEH EHEHEHKSQK AHGSHDHNLR AAYFHVLADA
LTSVLAIAAL LFGKYMGLTW LDPIMGIVGA VIISRWSWGL IQQTSPILLD GGVKASLQRK
VTQTIEAVTD HQVADLHLWR VSADHHAIMV SIVSHSPKDV SYFNQLLSQF PELAHITIEL
HTCRQRECMA KEA
|
|---|
| |