Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2370 |
Symbol | |
ID | 5754129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2794875 |
End bp | 2795903 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641288664 |
Product | diguanylate cyclase |
Protein accession | YP_001554798 |
Protein GI | 160875482 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.257282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.644967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCTA CTGCAGAAAA TAAAGAGCTT GATTCTGCCG CGCAAATTTT GCGTTTGGCC GTACCGCAAA TGTCTGCCCT CGATATCCCC GTTACACCTG AAAACTACAC TGTTTGGTAT GAATATTTTG CAGGGACAAA TCTCGATTTA AATCGTGCGA TTGATGGCTT TCTGGCTAAT TCGGTCTCTT TTACTAAGGA GGTCAATACC AGCCTGTATA AGAACTTCAT TCAAGAACAG TCACCCGAAG TGATTGAAAA TGTGCAGATT GAAACGCAAA TCCTGATCAA TAGTTTGTTA AGTAAAATCA GCCAGTTGAG TCAAGGTACC GCGGCGTTTT CAGGTTCATT AGCCGAGTTT GGTCTACGTC TACAGACGAA TCCCGACATT AATACCTTAA ACGAGCTGGT TGATGGTGTA GTCGATGAAA TGCAGATGCT GCTCATCAAC AACCGTGAGA TGGAGCAAAG CCTGTGCACC ATGGGCCAAG AAGTGCAAAA TCTTAAATCG GAAATGGAAA ACCTGAGCCT GGCAGCGATG ACTGACCAAT TAACCTCGCT GCACAATCGC CGTGCCTATG AGTTAAGTAT TCAAGATCAA ATCTACCTCT CCCAAGATCA CCAAACCCGT TGCAGTCTTT TACTGATCGA TATTGATAAT TTTAAAGCCT TTAACGACAC CTATGGTCAT TTGACCGGCG ATAAAGTGTT GGCCTATGTC GCATTAGCCT TGAAACAATG TGTGCGAGGG GATGATTTTG TGGCGCGCTA TGGCGGCGAA GAATTTGTGG TGGTGTTACC TAACACTCAT TTTCACGATG CATTACAAGT GGCTGAGAAT TTGCGGGAAC GTATCTCTGA GCGCCGCTTA ACCATAGGGA AAGACAAAAA GCTTTCCCTT GGCGCGATTA CTGTTTCTAT TGGTCTGGCT TCATTGCAGC AAGGCGACGA TGCAGAAACT CTATTCAGTC GCGCCGACAA AGCGCTGTAT CAAGCTAAGG CCGAAGGTCG TAACTGCGTG AGAGGATAA
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Protein sequence | MPSTAENKEL DSAAQILRLA VPQMSALDIP VTPENYTVWY EYFAGTNLDL NRAIDGFLAN SVSFTKEVNT SLYKNFIQEQ SPEVIENVQI ETQILINSLL SKISQLSQGT AAFSGSLAEF GLRLQTNPDI NTLNELVDGV VDEMQMLLIN NREMEQSLCT MGQEVQNLKS EMENLSLAAM TDQLTSLHNR RAYELSIQDQ IYLSQDHQTR CSLLLIDIDN FKAFNDTYGH LTGDKVLAYV ALALKQCVRG DDFVARYGGE EFVVVLPNTH FHDALQVAEN LRERISERRL TIGKDKKLSL GAITVSIGLA SLQQGDDAET LFSRADKALY QAKAEGRNCV RG
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