Gene Sbal195_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2348 
Symbol 
ID5754107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2768733 
End bp2769941 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content43% 
IMG OID641288642 
Productresponse regulator receiver modulated diguanylate phosphodiesterase 
Protein accessionYP_001554776 
Protein GI160875460 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC TCATCATAGA TGATCAGCGC TTTATTCGAG AAACCATGAA AGCCGATATC 
CATAAGTTCT TGGTTGACGA TAATGTGCAG ATCTATGAGG CCTGTAATGG TAATCAAGGC
ATAGAACTGA TTATTGACAT CGAAGTGGTG CTTGATTTGA TCATCATAGA TCTCAAGATG
GACCAAGGAG ATGGAATCGC AGTCATCAAT ATGTTGGCCT CCGAGCCCCG TTTTGCCGCG
ATTCCGATTG CGGTGATCAG CTCTTCGGAT AAACGGACTT TAGAGCTGGT GGACAATATC
ATCACAGTGC TGAGGCTCAA CTTGCTGGGG GTATTTGCTA AGCCTATCAA CGTGAATGAT
ATTTTAACGC CATTGTTAGA AGCATCCACG GATAGACATC ATGCGCATCA ACATCAATCG
ATCGTGCAAA ACAGGGCGGC CAATATCAAT GTGCGGCAAT TGCTTAAAGA TGAACAATTA
ATTCTCTGCT ATCAACCTAA GATCAACCTC AAGACCAAGG AAATCATAGG TTTTGAAGTG
CTGTCGCGGC TTTGCGATCA ATCCAATGGC TATATTTATC CCGACGTTTT TTTGCCACTG
GTTAATCAAC AGGGGCTGAA TAGCCTGTTC TCGCGGATGG TCATTTCCCA GGCGTTGCAA
TGTTGGTCGC GTCAACCTTT ACTGACGGCG TTTGCGCTGT CGATTAACAT TACCGCCGAC
GATCTGACCT GCGATGAACT GATTGAATTC ATCATCGAAT GTGGCCGTGA GCATAAACAC
ATCCATGTGA TTTTAGAGCT CACTGAATCG CAAGAGATCA TCAATCAAGA TAGAGTGCTT
AACTCAATTG CACGGCTGAT TATCAACAAT ATTGATATTT CCCTCGATGA TTTCGGTAAA
AGTTATTCCA CTTATGATCG CCTCGATGCC ATTCCCTTTA AAGAAATTAA AATTGATAAA
AGTTTTGTCT CCGATATGGA TATTAATCAC CAACATTATC TCATTGTGGA GTCCACCATA
GCACTTGCGC AGAAGATGCA CGTAAAGGTG GTTGCCGAAG GCGTTGAGAC AAGTGCAATA
GAAGCCATTC TCTCTGAACT AGGCTGTGAT GTTGCCCAAG GCTATTTATA TAGCCCGCCA
ATTGAAGGTC GTTATCTTAT TGATTGGATA GCGCAATACA ATAGGGAATG CCTAACCCAT
GGATACTAA
 
Protein sequence
MNILIIDDQR FIRETMKADI HKFLVDDNVQ IYEACNGNQG IELIIDIEVV LDLIIIDLKM 
DQGDGIAVIN MLASEPRFAA IPIAVISSSD KRTLELVDNI ITVLRLNLLG VFAKPINVND
ILTPLLEAST DRHHAHQHQS IVQNRAANIN VRQLLKDEQL ILCYQPKINL KTKEIIGFEV
LSRLCDQSNG YIYPDVFLPL VNQQGLNSLF SRMVISQALQ CWSRQPLLTA FALSINITAD
DLTCDELIEF IIECGREHKH IHVILELTES QEIINQDRVL NSIARLIINN IDISLDDFGK
SYSTYDRLDA IPFKEIKIDK SFVSDMDINH QHYLIVESTI ALAQKMHVKV VAEGVETSAI
EAILSELGCD VAQGYLYSPP IEGRYLIDWI AQYNRECLTH GY