Gene Sbal195_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2334 
Symbol 
ID5754091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2751463 
End bp2752842 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content48% 
IMG OID641288626 
ProductMATE efflux family protein 
Protein accessionYP_001554762 
Protein GI160875446 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0215455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATT CAGGCTATCA AGCCAAACGT TTAATCCAAT TGGCGCTGCC GGTGCTAATA 
GCTCAGGTCA CTCAGACCAT GATGGGCTTT ATTGATACCG TTATGGCGGG CCGTGTTAAC
GCGGTTGATA TGGCCGCTGT TGCGGTCGGC ACTAGCCTTT GGTTGCCCGC TATTCTGTTT
GTCCAAGGTT TACTGATGGC TTTTACGCCT TTATTTGCCC ACTACAATGG GGCGAATAAC
CAAAAAGCTA TCCAACCTTT GGCCTTTCAA GGTGCCTATC TTGCCATCAT TGGTGGCATT
GGCGTGATGA TTTTCCTCGC ATCAGCGCCC TTTGTGCTTG GCCATATGGA TTTAGAACCA
GAATTATACC GCTTAACCAT TGGATATCTC GACGGTATTT TATGGGGCGC GCCCGCATTT
GTACTTTATC AAGTGCTGCG CGGCTGTAGT GAAGGGATTT CTTACACGTT ACCGACTATG
GTCATTGGCT TTGTCGGCTT AGCAGTGAAC ATCCCCGCCA ACTACATCTT TATTTATGGA
CACTTTGGCG TACCTCCGAT GGGTGGCGCT GGCTGCGGTA TTGCCACTGC CTTGGTTTTT
TGGGCCATGC TGATTGCCAT GACGATTTAT ATGCAGCTGC ATAAAAAATT CGCGGCCTTG
GCTCCTTTCA GTAAATTTCA TCGTCCTGAC TTTGAAACGA TGAAAAAAAT GACCAAACTC
GGCATGCCGA TAGCTATGGC GCTGTTTTTT GAAGTGAGTT TATTTGCCAT TATCGCGCTG
TTACTCGCCC CATTAGGCGC AACTGTGGTG GCAAGTCACC AGATAGCACT GAACTTTTCT
GCCATCGTAT TTATGCTGCC GTTATCTATT GGTATCGCGG TATCGATTCG AATTGGTTAC
TACTTAGGCC GTGATCGCGC CGATATTTCC GCAGTGGTTA CCAAAGTGGG TTTATGGCTT
GCGCTGTCCC TTGCATTATC AACTGCAGTC TTGACCGTCA TATTTAGATT CCAGATTGCA
GAGCTTTATA ATGGTGATCC TGAAGTTGTC GCTTTAGCCG GCAGCTTGAT GTTGATGGCG
GCACTGTATC AATTATCGGA TTCAGTCCAA GTGGTTGCCG CCGGAGCCCT ACGTGGTTAT
AAAGATACCC GCAGTGCCTT TTATATCACG CTGTTTTCCT ATTGGGGCAT AGGGATGTCA
CTCGGTTATA CCTTGGCTTA TACGGATCAT ATCGTTCCTG CCATGGGTGC CCATGGTTTC
TGGTCCGGAT TGATTGCAGG CCTCACCTCG GCGGCGCTGC TATTTTTCAT TCGACTGCGT
TACATCCAAA AACATGGCGT GCATTTAAGC CTCATCGATG GTGATAGTGT GCATCATTGA
 
Protein sequence
MNNSGYQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVN AVDMAAVAVG TSLWLPAILF 
VQGLLMAFTP LFAHYNGANN QKAIQPLAFQ GAYLAIIGGI GVMIFLASAP FVLGHMDLEP
ELYRLTIGYL DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGVPPMGGA GCGIATALVF WAMLIAMTIY MQLHKKFAAL APFSKFHRPD FETMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRADIS AVVTKVGLWL ALSLALSTAV LTVIFRFQIA ELYNGDPEVV ALAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMS LGYTLAYTDH IVPAMGAHGF
WSGLIAGLTS AALLFFIRLR YIQKHGVHLS LIDGDSVHH