Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2334 |
Symbol | |
ID | 5754091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2751463 |
End bp | 2752842 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288626 |
Product | MATE efflux family protein |
Protein accession | YP_001554762 |
Protein GI | 160875446 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0215455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATT CAGGCTATCA AGCCAAACGT TTAATCCAAT TGGCGCTGCC GGTGCTAATA GCTCAGGTCA CTCAGACCAT GATGGGCTTT ATTGATACCG TTATGGCGGG CCGTGTTAAC GCGGTTGATA TGGCCGCTGT TGCGGTCGGC ACTAGCCTTT GGTTGCCCGC TATTCTGTTT GTCCAAGGTT TACTGATGGC TTTTACGCCT TTATTTGCCC ACTACAATGG GGCGAATAAC CAAAAAGCTA TCCAACCTTT GGCCTTTCAA GGTGCCTATC TTGCCATCAT TGGTGGCATT GGCGTGATGA TTTTCCTCGC ATCAGCGCCC TTTGTGCTTG GCCATATGGA TTTAGAACCA GAATTATACC GCTTAACCAT TGGATATCTC GACGGTATTT TATGGGGCGC GCCCGCATTT GTACTTTATC AAGTGCTGCG CGGCTGTAGT GAAGGGATTT CTTACACGTT ACCGACTATG GTCATTGGCT TTGTCGGCTT AGCAGTGAAC ATCCCCGCCA ACTACATCTT TATTTATGGA CACTTTGGCG TACCTCCGAT GGGTGGCGCT GGCTGCGGTA TTGCCACTGC CTTGGTTTTT TGGGCCATGC TGATTGCCAT GACGATTTAT ATGCAGCTGC ATAAAAAATT CGCGGCCTTG GCTCCTTTCA GTAAATTTCA TCGTCCTGAC TTTGAAACGA TGAAAAAAAT GACCAAACTC GGCATGCCGA TAGCTATGGC GCTGTTTTTT GAAGTGAGTT TATTTGCCAT TATCGCGCTG TTACTCGCCC CATTAGGCGC AACTGTGGTG GCAAGTCACC AGATAGCACT GAACTTTTCT GCCATCGTAT TTATGCTGCC GTTATCTATT GGTATCGCGG TATCGATTCG AATTGGTTAC TACTTAGGCC GTGATCGCGC CGATATTTCC GCAGTGGTTA CCAAAGTGGG TTTATGGCTT GCGCTGTCCC TTGCATTATC AACTGCAGTC TTGACCGTCA TATTTAGATT CCAGATTGCA GAGCTTTATA ATGGTGATCC TGAAGTTGTC GCTTTAGCCG GCAGCTTGAT GTTGATGGCG GCACTGTATC AATTATCGGA TTCAGTCCAA GTGGTTGCCG CCGGAGCCCT ACGTGGTTAT AAAGATACCC GCAGTGCCTT TTATATCACG CTGTTTTCCT ATTGGGGCAT AGGGATGTCA CTCGGTTATA CCTTGGCTTA TACGGATCAT ATCGTTCCTG CCATGGGTGC CCATGGTTTC TGGTCCGGAT TGATTGCAGG CCTCACCTCG GCGGCGCTGC TATTTTTCAT TCGACTGCGT TACATCCAAA AACATGGCGT GCATTTAAGC CTCATCGATG GTGATAGTGT GCATCATTGA
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Protein sequence | MNNSGYQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVN AVDMAAVAVG TSLWLPAILF VQGLLMAFTP LFAHYNGANN QKAIQPLAFQ GAYLAIIGGI GVMIFLASAP FVLGHMDLEP ELYRLTIGYL DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG HFGVPPMGGA GCGIATALVF WAMLIAMTIY MQLHKKFAAL APFSKFHRPD FETMKKMTKL GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY YLGRDRADIS AVVTKVGLWL ALSLALSTAV LTVIFRFQIA ELYNGDPEVV ALAGSLMLMA ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMS LGYTLAYTDH IVPAMGAHGF WSGLIAGLTS AALLFFIRLR YIQKHGVHLS LIDGDSVHH
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