| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2319 |
|---|
| Symbol | |
|---|
| ID | 5754076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2736455 |
|---|
| End bp | 2737741 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641288611 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001554747 |
|---|
| Protein GI | 160875431 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000145216 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATC CTAAATTTTT GCGCAACGAA TTAGAAGTTA CCGCTGAGCG ACTGGCCACC
CGTGGCTTTA TTTTAGACAT AGCTCACCTC ACTCAATTAG AAGAAAAGCG TAAGTCACTG
CAAGTGGCTA CCGAAGAATT ACAAGCGTCG CGTAATGCCA TCTCCAAATC CATTGGCCAA
GCTAAAGCCC GTGGTGAAGA TGTTGAAGCG ATCATGGCGC AAGTGGGCGA TTTAGGTTCA
CAGCTGGATG CCAAAAAGAT TGAACTGGCG GCCGTGCTTG AAGAAGTCAA TGCCATTGCC
ATGTCAATGC CCAACCTGCC AGACGAATCC GCGCCAATCG GTGCCGATGA AACGGAGAAC
GTTGAAGTTC GCCGCTGGGG TACGCCACGC ACGTTTGATT TCCCAATTAA AGATCATATC
GATTTAGGCG AAGGCTTAAA CGGTTTAGAT TTTAAAAATG CAGTGAAAAT AACTGGCTCA
CGTTTCATCG TGATGAAAGG CCAAGTTGCT CGCTTAAACC GCGCCATTGG TCAGTTCATG
CTGGACTTGC ACACCACAGA GCACGGTTAT ACCGAAGCCT ATGTGCCGTT ACTGGTTAAC
GAGGCAAGCT TGCTGGGCAC AGGTCAACTG CCTAAGTTTG GTGAAGACTT GTTCCACACG
AAACCTGCCA CCGAAGAAGG TCAGGGTTTG AGCTTGATCC CAACGGCCGA AGTGCCATTA
ACCAACTTAG TGCGCGATAG CATTGTTGAT GAAGACGAGC TGCCGATTAA ATTAACCGCG
CATACCGCAT GTTTCCGCAG CGAAGCGGGC TCATACGGCA AAGACACTCG CGGTCTGATC
CGTCAGCATC AGTTCGATAA AGTTGAAATG GTGCAAATCG TTAAGCCAGA AGATTCAATG
GCGGCGCTCG AAGCGCTAAC AGGTCATGCT GAAACGGTAT TGCAACGTTT AGGTCTACCG
TACCGTACTG TGATTTTATG TACTGGCGAT ATGGGCTTTG GCTCAAGCAA AACCTACGAC
ATCGAAGTCT GGTTACCTGC ACAAAACACT TATCGTGAAA TTTCTTCTTG CTCAAACATG
AAGGATTTCC AGGCCCGTCG TATGCAAGCG CGCTACCGCG TGAAAGCAGA CAATAAGCCC
GCGTTACTGC ATACCTTAAA CGGTTCCGGT TTAGCTGTGG GTCGTACCTT AGTCGCTATT
TTAGAAAACT ATCAAAATGC CGATGGCAGT ATCACAATCC CAGAAGTGCT GCGTCCATAC
ATGGGCGGCT TGACTCAAAT AGGCTAA
|
|---|
| Protein sequence | MLDPKFLRNE LEVTAERLAT RGFILDIAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ
AKARGEDVEA IMAQVGDLGS QLDAKKIELA AVLEEVNAIA MSMPNLPDES APIGADETEN
VEVRRWGTPR TFDFPIKDHI DLGEGLNGLD FKNAVKITGS RFIVMKGQVA RLNRAIGQFM
LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEM VQIVKPEDSM
AALEALTGHA ETVLQRLGLP YRTVILCTGD MGFGSSKTYD IEVWLPAQNT YREISSCSNM
KDFQARRMQA RYRVKADNKP ALLHTLNGSG LAVGRTLVAI LENYQNADGS ITIPEVLRPY
MGGLTQIG
|
|---|
| |