| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2278 |
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| Symbol | |
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| ID | 5754034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2701135 |
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| End bp | 2701785 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641288569 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001554706 |
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| Protein GI | 160875390 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0242447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.65037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTAC TCGACCATCC AATCCAATTG ATCATTATGT TGTTTTGCTT GTCACTGCTG
CCGCTGTTCG CCGTGATGGG CACTTCATTC TTGAAATTGG CAATTGTGTT CTCTATGTTA
CGTAATGCCT TAGGGATCCA GCAGATCCCA CCCAATATGG CAATTTACGG CCTCGCATTA
ATTCTCACTC TGTTCACCAT GGCACCCGTG GGGATGGCAA TCAATGACAA TCTAAAAGCC
ACCCCTATAG TGTTCGATGC ACCCAATGTA TTTGAGCAAA TCAACACTGA AGCCATAGCA
CCCTACCGCG CATTTCTCGA AAAAAATACC AGCAATACTC AGATTGAATT TTTCGCCAAT
ATTGGCCATA AGGTCTGGCC CGAAAAATAC CAGCAAGTGC TGACCAAAGA CTCACTGTTA
GTGATGGTGC CAGCCTTTAC TATGAGTCAG CTCATAGAGG CATTTAAGAT AGGTTTACTC
ATTTATCTTC CCTTTGTCGC AATTGACCTT ATCGTCTCCA ATATTTTACT GGCAATGGGC
ATGATGATGG TGTCCCCCAT GACGATAGCC CTACCGTTCA AGTTGTTGAT TTTTATCTTG
ATGGGTGGAT GGGAAAAACT GATCAGTCAA CTAATGATGT CATTCTCATG A
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| Protein sequence | MTLLDHPIQL IIMLFCLSLL PLFAVMGTSF LKLAIVFSML RNALGIQQIP PNMAIYGLAL
ILTLFTMAPV GMAINDNLKA TPIVFDAPNV FEQINTEAIA PYRAFLEKNT SNTQIEFFAN
IGHKVWPEKY QQVLTKDSLL VMVPAFTMSQ LIEAFKIGLL IYLPFVAIDL IVSNILLAMG
MMMVSPMTIA LPFKLLIFIL MGGWEKLISQ LMMSFS
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