| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2273 |
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| Symbol | |
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| ID | 5754029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2695832 |
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| End bp | 2697889 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641288564 |
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| Product | secretion system apparatus protein SsaV |
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| Protein accession | YP_001554701 |
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| Protein GI | 160875385 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.660875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.389289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA TTAGTCGTTG GTTAAGTAAA GCCGCAGGGC GTCACGATAT CATCTTAAGT
GCCATGTTAA TGGTAGCTGT ATTTATGATG ATCTTGCCTC TACCGACACC TTTGATCGAC
GTATTAATTG CCTTAAACCT TGGCTTGTCG ATAGTGTTAT TGATGATCGC CATATACATC
CGTGACCCTT TAGAGTTCTC AGTATTTCCA TCCCTACTAT TGATCACAAC CTTATATCGT
CTGGCACTTA CTATCAGTAC CAGTCGTTTA ATTTTGCTGC AGCATGATGC TGGAGATATT
GTATACACCT TCGGTAACTT CGTTGTCGGC GGCAACTTAG CGGTCGGAAT TATTATCTTT
GCCATCATCA CCATAGTGCA GTTTATCGTT ATCACTAAGG GGTCTGAGCG GGTGGCGGAA
GTGAGTGCAC GTTTTTCCCT CGATGGTATG CCTGGTAAGC AAATGAGTAT CGATGGCGAC
ATGCGTGCTG GCATCATTGA CGCTAAAGAG GCAAAGCGTC AACGGGCACA AGTTCAGAAA
GAAAGTCAGC TTTATGGCGC GATGGACGGC GCGATGAAGT TTGTAAAAGG CGATGCCATA
GCCAGTATTA TTGTCATTTT AACTAATATC ATTGGTGGTA TCGCTGTCGG TGTCATGCAG
CACAATATGT CGGCTGCAGA AGCATTAAAT ACTTATGCAG TCTTGTCTGT CGGGGATGGT
TTGATAGCCC AAATACCTTC GTTACTGATT TCAGTCACTG CAGGCTTAAT TGTGACCCGA
GTTCCTGGAG AGCAGAGACA GAATTTAGCC AACGAATTAG TGATGCAAGT AGGGCGTCAA
CCCGCATCAT TGCAAATGGC CGGGATAGTC ATGTTCATCT TTGCTTTAAT CCCTGGCTTC
CCAATTTTAG TCTTCGGCAC ACTCGGTTCG GTCGTTTTAG GGGCTTCATT GTGGTTGAAG
CGTCAGCAAA AACGAGCAAG TGCTCAAGGA GAGGAGAGCC ATTTCACTGA CGCTGGCAAA
AGTGACACGG CCAATGTCGA CAATATGGCA CCAGGGGCTG TACCACTGAT TTTATATCTT
GGAGCCGATG TGCCTATCCA TGGGGTTAAA GAGGCACTGC AAAAACTACG TTGGCAATGG
TTTGAACAAT TGGGCGTGCC ATTACCGGAA ATCCAATTAC AAATAGCGAA GAAAGGCAGC
CTAGGTTGTT GTGATGTGCT CTTGTACCAA GAATCTGTAT TGCAATTGCA GCTAGTACCA
CAGGAAGCCC TTTTGATTGA CTCCATCGCA ACGATTCCAT GCCGTGTCGA GTCCATTCCT
TTTAGTAATC AAAGATTGCA TTGGATCAAA GGTAATGCGC TTGAACAGGC GGAAGCCCAA
GGTTTAGCTG TTTGTCGTGA TGAGCAAATT CCCGCTTATG TGATGGGTAA AGTGATCGAC
CGCTATGCAG GGGAGTTTAT TGGTGTACAA GAAACTCGGT ATTTAATGGA TGCTATGGAG
GCTCGCTACG GTGAGCTCGT CAAGGAACTT CAACGACTGT TGTCTGTGGG GAAGGTCGCC
GAGATCCTAC AACGCTTAGT CGAAGAGGGG ATTTCAGTGC GCGATCTACG GACTATTTTT
GAAACCTTAG TCGAATGGGT GCCAAAGGAG AAAGACATCA TCATGTTAAC TGAGTATGTA
CGGATTGCGC TTCGCCGTCA TATTCGTCGC AAGTTTGCTA CCCCACAAGG TTGGATCGCT
GTGCTCATGG TTGGAGAAGG AATTGAAAAT GTGATCCGTG AATCGATACG ACAATCGACT
GCTGGCTCTT ATTCGGCCTT GGACATGGCA CAAACTCAGC AAATATTAAC CTGCATTCAA
GAACAGCTGC CACCGGAACA AACCTGTGTA CTGTTGACTT CGCTCGATGT GCGCCGTTAC
CTGCGAAAAA TCGTAGAACG CGAGTTATTT AGCACACCCG TTTTGTCGTT TCAGGAATTA
GGCGACGATG CAGAAATAAA AGTCATAGGC CAAGTGGACT TAGTGGGTGA GGTACTCGAT
GCCGCACTGG CGAGCTAA
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| Protein sequence | MNLISRWLSK AAGRHDIILS AMLMVAVFMM ILPLPTPLID VLIALNLGLS IVLLMIAIYI
RDPLEFSVFP SLLLITTLYR LALTISTSRL ILLQHDAGDI VYTFGNFVVG GNLAVGIIIF
AIITIVQFIV ITKGSERVAE VSARFSLDGM PGKQMSIDGD MRAGIIDAKE AKRQRAQVQK
ESQLYGAMDG AMKFVKGDAI ASIIVILTNI IGGIAVGVMQ HNMSAAEALN TYAVLSVGDG
LIAQIPSLLI SVTAGLIVTR VPGEQRQNLA NELVMQVGRQ PASLQMAGIV MFIFALIPGF
PILVFGTLGS VVLGASLWLK RQQKRASAQG EESHFTDAGK SDTANVDNMA PGAVPLILYL
GADVPIHGVK EALQKLRWQW FEQLGVPLPE IQLQIAKKGS LGCCDVLLYQ ESVLQLQLVP
QEALLIDSIA TIPCRVESIP FSNQRLHWIK GNALEQAEAQ GLAVCRDEQI PAYVMGKVID
RYAGEFIGVQ ETRYLMDAME ARYGELVKEL QRLLSVGKVA EILQRLVEEG ISVRDLRTIF
ETLVEWVPKE KDIIMLTEYV RIALRRHIRR KFATPQGWIA VLMVGEGIEN VIRESIRQST
AGSYSALDMA QTQQILTCIQ EQLPPEQTCV LLTSLDVRRY LRKIVERELF STPVLSFQEL
GDDAEIKVIG QVDLVGEVLD AALAS
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