| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2266 |
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| Symbol | |
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| ID | 5754022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2687473 |
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| End bp | 2688192 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641288557 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001554694 |
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| Protein GI | 160875378 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.14672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACATT TTAAATGGTC AATATTGTTG CTCGTCTTCG CATTGACTGG ATGCAAAGTC
GATCTCTATC GAGATCTTCC ACAAGATGAA GCGAATCAAA TGGTCGCCCT GTTGATGCTT
AATCACATAG ATGCCAGTGC TGAAGCGGAT CAAAAATCAG GTAATGTGTC CTTAAAAATA
GATAAAGATC AATTTATCAA TGCCGTTGAA TTACTGAGGC AAAATGGCTT TCCTAAACCT
CATTATGCCA ATATCGAGGA TTTGTTCCCT TCGGGTCAGT TAGTGACTTC ACCCGCCCAA
GAGGAAGCGA AAATGGGTTA TCTAAAAGAG CAACAACTTG AGCGTACCTT GTCGAGTATG
GATGGGGTGA TTAGCGCTAG GGTGTCTATT GCTGAACCTG CACCCGACTC AGGGCGTCAG
ATTGCACTGA CTAAGTCGGC CTCCGTATAC ATTAAATATT CACCTCAGGC TAACTTAACA
AATACGGAAA ATCAGATTAA GAGCTTAGTG CAGAATGCCG TTCCAGGACT GAGTTACGAC
AATATCAGTG TCTTTTTGCA AGCTGCGAGT TATCGCTATC AAGCAATTAC CCAGCCGACT
AGCAGTAGTT CATCTCAATT TTTAGCCCAG GTCGAAGCGT ACAAGTTACC ATTAGTGATC
AGCTTATCTG GAATAATGCT ACTCAGCATA GGCGGTATGT GGTGGATGAG ACGTAAGTAA
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| Protein sequence | MKHFKWSILL LVFALTGCKV DLYRDLPQDE ANQMVALLML NHIDASAEAD QKSGNVSLKI
DKDQFINAVE LLRQNGFPKP HYANIEDLFP SGQLVTSPAQ EEAKMGYLKE QQLERTLSSM
DGVISARVSI AEPAPDSGRQ IALTKSASVY IKYSPQANLT NTENQIKSLV QNAVPGLSYD
NISVFLQAAS YRYQAITQPT SSSSSQFLAQ VEAYKLPLVI SLSGIMLLSI GGMWWMRRK
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