| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2247 |
|---|
| Symbol | |
|---|
| ID | 5754003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2670170 |
|---|
| End bp | 2672944 |
|---|
| Gene Length | 2775 bp |
|---|
| Protein Length | 924 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641288538 |
|---|
| Product | integral membrane sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001554675 |
|---|
| Protein GI | 160875359 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.6065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0077102 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC GATGGAAGTT TTCCTTGGTC ACTAAACTCA CAGTCTCCTT TATGTCTGTG
CTCGTTGCCC TGTGGCTGAT GATTGAATAT CAATCCTATA ACAACACTTT CAAGCATACA
CTCGAACGCT CCCTCGTCGC CTTTAGTGAA CTCAGCGGAC TACGGGCCGA GGTCAGCAAT
GCACTGTTCG CCGATGCCAG TTATGATGCG CGCCAGCTCA ATAAGCAGCT CAAGCAGTTC
GCTTCGATGG ACAAAGTGAA TGCCCAAGAA ATTGTTTCTC ATTATTTTCC ATTTCAAGCG
AAAAGCCATG ACGATACTTT GGCTATGTGG GTGGCGCAGA CGTTTGGTAA TGCGGGACAG
CACAGATACT TAGATACTTT CATCTTGAAG CCTAATGAAG GTATTACTAT TTATGCGGCG
TCTGATGCTA ATGATGAATA TTTTAAAATT CGTTTGCGCG AGATAAAACA GCTCTCAGTA
CAAACGTCGA CAACGGGTTA TCGTTGGGGA ACACCGATCA AGGACACGAA TTCTGAGAAC
TACCACTTAA GTTTCAGTTA CTCGAGTGAC CCGCAGGACC CCCTATCACC CCAAGTCGGT
TTTAGTATCA ATTTAGCGTC GGCCATGTCA CTGAATAATG CCTTAGGACC TGGGGACATT
AGCTTTTTCA TGACACCTCA AGGAGAGCTA TTCTCTAAGT CGACCTTAAC CTTAACCCCG
TCAATACTCG TTAAACTGAA AGACGAATTT AGTCGTGCTG AGCCAAACGC TAAGAGTACC
GCACACGCAC TGGGCGATTA CTATGTCATA AAAGAGCATA TTCAAGGTCC AGGCTGGCAA
CAGATCACGT TAATTTCTGG TGTCTACCTT AAAGATATGG CGTTGATGCC TTTCTTTAAA
GAGCTGTCAT GGTCTCTGTT ATCTTTAGTT TTTATGGCAA TTATCCTACT GAATGTATTA
CGTATTAACC TTGCCAGGCC TATAGGCCAC TTCGTTAATA TCATCAACAG TGCCAGCCAG
CCGACCTTCG AGCGCCGACT GCCGCAGAAT CGTAATGATG AGCTAGGGCA AATTGCGAAA
GCCTATAATC ATCTACTCGA TACAGCCAAA GAGAACTATG ATGAGTTAGA ACAAAAGGTC
ACCCTGCGTA CCCATGAATT AGCCTTGGCA AAGCAAGAAG CCGAAAAGGC CAATGAACGT
AAAACCGAAC ACCTCACAAA TATCAGCCAC GAAATTCGCA CTCCACTAAA TGGTATTACT
GGAGCGCTCG AATTGCTGCG AAATACCCAA CTAACACCTA AGCAAATGGA TTTGCGTGAT
ACTGCATATA ATTGTGCTAA TTCTTTACTG GCTATTATCA ATAACTTATT AGATTTTTCC
CGTATAGAGG CCGATCAGAT TGAATTAAAC TTACAGTCTT ACCCCATTTT GAAGTTGGCT
GATGATGCTA TGATCACCAT CCAATCTCGG GTCGTGAATA AACCCATCAC CCTGAAATGC
TTAGTCAATG CTAATGTAGC CGAGAAAGCG TTACTGGATC CTCTGCGTGT CAGGCAAATT
CTGGTTAACT TGCTTGGTAA TTCGGCTAAA TTTACTGAGG CTGGACAGAT TTTATTACGT
ATTGAAGTGG TTAAGCAGCA TCTGTATTTT AGTGTGGAGG ACACGGGGGT GGGTGTTGCC
ATTCAAGATC AGCAGCGTAT CTTTGAACCT TTTGCACAAA CTTGCCATCA TAAATCGGGC
ACCGGGCTTG GTTTGCCAAT CTCAGCGAAA CTCGCTAGCA AAATGAAAGG CAAACTCACA
ATGTTTAGCA CTTTAGGCGA AGGCAGTACC TTTATTCTCG ATTTACCCTT AATTGATCCA
ACTGCGCCAC TGTGTTTGCC CAATACACCG ATTGTCGCCC CTTTGGCCTT ACATCCACAA
CTCACACTTT GGGGAGCTTT GCCCATTGAA GGTGAGAATC CGGACTTAGC GTCTCCTGAA
CTGGCTCACT TGCCGGCTCG TTTATGGCAG AGGCTTTTTG AAATTAGGCA CAACCTGCCG
CATCAGCAAC GTCAACATAC CCCAACACTT CTCCCTTGGC AGTTAAAGAT CCTCTTAGTC
GACGATGTCG AAACTAACCG CGATATCATA AGTAAAATGT TACTTGAATT AGGGCAACAG
GTCATTGCGG TTAGCAGTGG CGAAGCGGCG TTAGAAAAAG GGACTCGACA TATCTTTGAT
CTCGTGCTGA TGGATATTCG CATGCCAGGA CTCGACGGCT ACCAAACAAC GCAACAGTGG
CGCCATAGTG AAAATATCCT CGATGGTGAT TGCCCTATTT TTGCACTCAC TGCCAATGCG
AATCCTAAAG AGCATGACAC AATAGAAGCC GCGGGAATGA ATAGTTATAT AACCAAACCA
GTGTCATTGA AGCAGCTTAA CCATGCACTC GAAGCCGCGG CCGATATGCA GTTGGATCGT
GATATGCCAC TCGTGATAAA CAATGAAATC GATGCGCCTA TGATTGATTT TTCACAAACG
GATCTGAATC ATAGACTCTC CGTGCATCTG GCCGATATGG CACATCAGGC CAAGTTACAT
ATAGGGAAAC AGGCTTGGAA GGCATTGAGT GATGTATTGC ATACCATCAA AGGTAGCGCT
GGCTTAGCAG GTAAAAAAGA CATTGCAAAT GAAGCGGCTG ACTTAGAGGT TGCACTCGAA
GCTGAAGAAT GTTTGAGCCT AGCGGAATTT AGCGCACTCG ATAAGTTAAT TCACAGATTA
GATGCTGAAA GTTGA
|
|---|
| Protein sequence | MKIRWKFSLV TKLTVSFMSV LVALWLMIEY QSYNNTFKHT LERSLVAFSE LSGLRAEVSN
ALFADASYDA RQLNKQLKQF ASMDKVNAQE IVSHYFPFQA KSHDDTLAMW VAQTFGNAGQ
HRYLDTFILK PNEGITIYAA SDANDEYFKI RLREIKQLSV QTSTTGYRWG TPIKDTNSEN
YHLSFSYSSD PQDPLSPQVG FSINLASAMS LNNALGPGDI SFFMTPQGEL FSKSTLTLTP
SILVKLKDEF SRAEPNAKST AHALGDYYVI KEHIQGPGWQ QITLISGVYL KDMALMPFFK
ELSWSLLSLV FMAIILLNVL RINLARPIGH FVNIINSASQ PTFERRLPQN RNDELGQIAK
AYNHLLDTAK ENYDELEQKV TLRTHELALA KQEAEKANER KTEHLTNISH EIRTPLNGIT
GALELLRNTQ LTPKQMDLRD TAYNCANSLL AIINNLLDFS RIEADQIELN LQSYPILKLA
DDAMITIQSR VVNKPITLKC LVNANVAEKA LLDPLRVRQI LVNLLGNSAK FTEAGQILLR
IEVVKQHLYF SVEDTGVGVA IQDQQRIFEP FAQTCHHKSG TGLGLPISAK LASKMKGKLT
MFSTLGEGST FILDLPLIDP TAPLCLPNTP IVAPLALHPQ LTLWGALPIE GENPDLASPE
LAHLPARLWQ RLFEIRHNLP HQQRQHTPTL LPWQLKILLV DDVETNRDII SKMLLELGQQ
VIAVSSGEAA LEKGTRHIFD LVLMDIRMPG LDGYQTTQQW RHSENILDGD CPIFALTANA
NPKEHDTIEA AGMNSYITKP VSLKQLNHAL EAAADMQLDR DMPLVINNEI DAPMIDFSQT
DLNHRLSVHL ADMAHQAKLH IGKQAWKALS DVLHTIKGSA GLAGKKDIAN EAADLEVALE
AEECLSLAEF SALDKLIHRL DAES
|
|---|
| |