Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2229 |
Symbol | |
ID | 5753985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2646346 |
End bp | 2648349 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288521 |
Product | outer membrane protein |
Protein accession | YP_001554658 |
Protein GI | 160875342 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00516967 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0011455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTTTA AATTGAATTT AATCACCATT GGATTGATTG CCGCCTCTGC AAGCGTTAAC GCCGCAGACT TTTCAGTTAA GCAAGCCAAT ATCAACCAGG TCAACACCAG CGCCTATCAA TGTAAGGCCT GTACCGTGAA GCTGGGCTAC CAAGGCGAAG TCAATGCCAA TGTTGGTTGG GCAAGCAGTG ACGATATCCA CTCAGGTAAT AGCTTTGGCG ACAGTGATGC GGGCTGGCGT AGCAGTGTCG GTGGCGATGT GAGTTATCGA CAGGGTGAAT ACCACGCAGC AATGCAAGCT GATGAACTCG GTTCGGACAA CGGTTATCTG CACCTCGAAG CCGTCAAAAA CAATCTGGGC GGTGTCCAAC TCGATTACAG CCTACTGACC CGTTATGACG CCACGGCCCA AACCCAACTA TGGCATAACA ATGGATTGCT GCTACCCGAT AGTCACACTA GCTCCCTTGA CCTCGAATTA CAACGTGAAA AAGTCGGTAT CGGCCTTGAG GGTGATTTAG ATGCACTGCT TAATGGCCTT AAGGGTTATA TCAACTATGA CCACGAGGAT AAAACGGGAA ATCGTCGCAG CAGTTTATTA GCCAACTCTG GCCCAATAAA CTTCGCCTTA CCCGTGGATG CGACCACTCA AAATATCAAT GCCGGTATCA GCATCGACCA GCACCAATGG CAGAGTGAAC TGGCCTATAA CGGCAGTTAC TACCGCAATT ACATTAATCA CTTAAGTCTG CCCTATGCCG ACAATGTGTA TGCCGCCACT CCGGATAACG ATGCCCATCA AGTCTCGTTG ACAGGCCAAT ATTTGCTTGG CAGCAGTGTG ATTAACGGCC GCCTTGCCAC AGGCCGAATG ATCCAGGATG ACAATCTAAT CCAAGTCAGC GGTAATCCCC TACAAAACTG GGACGGTGAA GTGGAGACCT TAGACGCGCG TATCGGCTTT AGCAGTATGT TAAGCCCCCG CTGGCGCCTG AACGGTCAAC TGGATTACAG CGATCGCGAT AATAAAAGCT CTACCTGGGA CTTTGCCCAA TTTGAAGTCG ACAACGTCAG TGGCGCCTTT AAGCAAAACG TGGCGATGGA TATTCAGCGT ACCAACTTCA AACTGCAGAG TAGTTACCGT TTCAACAGCG ACTATCGCTT ACTCGGCGGC TTTGATTACA AAGCGGTTGA GCGTAACTAT ACCGAGCGTG AAGAGACCGA AGATAGCGCG CTATGGGCTA AGCTGACTAT CCGCGCCATC CCTAAAACGA TGGTAGATCT TAAAGCCAGT TACGAAACCC GTGATGGCTC AACCTACGAC AGTCTAGAAG CCACCTCAAT CGAAGAAAAC CCGCTGCTAC GCAAGTTTTA CCTTGCTGAT AGAAACCGTA ATGGGCTCGA ACTCAGGGTT AATCATACTC CCCTGCAATG GCTAACGGTT GATTTCGATG CCCATTACAA CAACGACAAC TACGACAGTA CCCTTATTGG TTTAACGGGG GTGAAGGACT ACGGGTACAA CGTACAACTC AGTGCCCAGC TGTGCAACAG ACTCAACGTT TTTGCTAACG CAGGGCAACA GTGGATTGAG TCTGACATGG CGGGAAGCCA AGCTTATGCC TCCCCTGATT GGTACACCAA TGTCGACGAT GAATTTATCG ACTTCAATAT TGGTTTTACC TACGACGGCC TGATGGATGA CCGCTTAAGC ATTGGGGGAA ATTACCAATT TGCGAACTCC GCAAGTGACA CCCTAATCAC CACAACCTCA GACCAACCTT ATGGCGATTA CTACTCCTAC AGCCACAACC TTGAGCTGTA TGGCCGTTAT GCCCTGAACG AGCGCATGGG ACTCAAGCTG AGCTACCAGT ACGAACGTTA CTACGACACT GACTACGCCG AGGTCAGCCC CTATGCCGTC CCAGGATTAG TGACCTTGGG TGAGCTTAAT CATAACTACA ACGCGCATCT GCTGATGTTG ACCTTCAGCT ACATGCTGCC TTGA
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Protein sequence | MKFKLNLITI GLIAASASVN AADFSVKQAN INQVNTSAYQ CKACTVKLGY QGEVNANVGW ASSDDIHSGN SFGDSDAGWR SSVGGDVSYR QGEYHAAMQA DELGSDNGYL HLEAVKNNLG GVQLDYSLLT RYDATAQTQL WHNNGLLLPD SHTSSLDLEL QREKVGIGLE GDLDALLNGL KGYINYDHED KTGNRRSSLL ANSGPINFAL PVDATTQNIN AGISIDQHQW QSELAYNGSY YRNYINHLSL PYADNVYAAT PDNDAHQVSL TGQYLLGSSV INGRLATGRM IQDDNLIQVS GNPLQNWDGE VETLDARIGF SSMLSPRWRL NGQLDYSDRD NKSSTWDFAQ FEVDNVSGAF KQNVAMDIQR TNFKLQSSYR FNSDYRLLGG FDYKAVERNY TEREETEDSA LWAKLTIRAI PKTMVDLKAS YETRDGSTYD SLEATSIEEN PLLRKFYLAD RNRNGLELRV NHTPLQWLTV DFDAHYNNDN YDSTLIGLTG VKDYGYNVQL SAQLCNRLNV FANAGQQWIE SDMAGSQAYA SPDWYTNVDD EFIDFNIGFT YDGLMDDRLS IGGNYQFANS ASDTLITTTS DQPYGDYYSY SHNLELYGRY ALNERMGLKL SYQYERYYDT DYAEVSPYAV PGLVTLGELN HNYNAHLLML TFSYMLP
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