| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2227 |
|---|
| Symbol | |
|---|
| ID | 5753983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2643093 |
|---|
| End bp | 2643770 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641288519 |
|---|
| Product | dimethylsulfoxide reductase, chain B |
|---|
| Protein accession | YP_001554656 |
|---|
| Protein GI | 160875340 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.214498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0362108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA AAACTCAATT AGGATTCTAT TTCGATAGTA GTAAATGTAC AGGTTGTAAG
ACTTGTCACA TTGCTTGTAA AGACCGAATG GTTGGAAAAA TTCGGAACAA AGATGATGTG
GCATCAAATG GCGTAGCTTC CCTTCCTGGT ATGTTATGGC GTCGAGTATA CGAATACGGT
GGAGGAACCT GGAGTCAGAA TAGTGATAAT AGCTTTGAAC AAAACGTATT TGCTTACTAC
ACCTCGATTA GTTGTAACCA TTGTTCAGAA CCTGTTTGTG TAAAAGCCTG CCCAACAGGA
GCGATGCACA AACGCAAGGA AGATGGTCTG GTATTAGTAG AAGAATCACT TTGTATTGGT
TGTCAAAGCT GCTCTAGAGC ATGTCCTTAC GATGCTCCGC AAATTGATAG AGATCGTAAA
GTAATGACTA AGTGCGATGG TTGCTACGAT CGTCTAGCCG AAGGGAAAAA GCCTATTTGT
GTAGAAGGCT GCCCTTTGCG AGCATTAGAT TTTGATACGA TGGAAAATCT ACGGAAAAAA
TATGGCAATG GGGATGGTCA CTTTGCTCCT TTACCTTCGC AATCAATAAC TTCGCCAAAT
TTAATTGTAA AAGCCTCTCG AAAATCAAAA TCGACAGGCA ATGATGATGG TAGGGTGTTG
AATATACGCG AAGTTTAA
|
|---|
| Protein sequence | MTEKTQLGFY FDSSKCTGCK TCHIACKDRM VGKIRNKDDV ASNGVASLPG MLWRRVYEYG
GGTWSQNSDN SFEQNVFAYY TSISCNHCSE PVCVKACPTG AMHKRKEDGL VLVEESLCIG
CQSCSRACPY DAPQIDRDRK VMTKCDGCYD RLAEGKKPIC VEGCPLRALD FDTMENLRKK
YGNGDGHFAP LPSQSITSPN LIVKASRKSK STGNDDGRVL NIREV
|
|---|
| |