Gene Sbal195_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2178 
Symbol 
ID5753931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2589625 
End bp2590266 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID641288467 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_001554607 
Protein GI160875291 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.105044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00210413 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTGAGA ATAACTGGTC ACTACAGCCA CAAGATATTT TTAAACGCAG CCCTATTGTT 
CCTGTTATGG TGATTAACAA GATTGAACAT GCGGTGCCAT TAGCGCGAGC ACTGGTTGCC
GGCGGCATTA GCGTGTTAGA AGTGACTTTG CGTACACCTT GCGCACTCGA AGCTATCACT
AAAATCGCCA AAGAAGTGCC AGAGGCCTTA GTGGGCGCGG GTACTATCTT AAACGAAGCT
CAGCTTGATC TTGCGATTGC CGCTGGTGCG CAGTTTATTA TTACCCCAGG CGCTACAGTT
GAACTGCTCA AAGCCGGTAT GCATGGTCCT GTACCATTGA TCCCAGGCGT TGCGAGCATT
TCAGAAGTGA TGACGGGGAT GGCGCTTGGT TACACCCACT TTAAATTTTT CCCAGCAGAA
GCTTCGGGTG GTGTGGATGC ACTGAAAGCC TTCTCGGGTC CGCTAGCGGA TATTCGCTTC
TGCCCAACAG GTGGCATTAC GCCAAGCAGC TATAAAGATT ATTTAGCGCT GAAAAATGTC
GATTGTATTG GTGGCAGCTG GATTGCGCCA ACGGATGCAA TGGAACACGG CGATTGGGAT
CGTATCACTC AGCTTTGTAA AGACGCCATC GGCGCTTTAT AA
 
Protein sequence
MLENNWSLQP QDIFKRSPIV PVMVINKIEH AVPLARALVA GGISVLEVTL RTPCALEAIT 
KIAKEVPEAL VGAGTILNEA QLDLAIAAGA QFIITPGATV ELLKAGMHGP VPLIPGVASI
SEVMTGMALG YTHFKFFPAE ASGGVDALKA FSGPLADIRF CPTGGITPSS YKDYLALKNV
DCIGGSWIAP TDAMEHGDWD RITQLCKDAI GAL