Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2178 |
Symbol | |
ID | 5753931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2589625 |
End bp | 2590266 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641288467 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_001554607 |
Protein GI | 160875291 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.105044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00210413 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTGAGA ATAACTGGTC ACTACAGCCA CAAGATATTT TTAAACGCAG CCCTATTGTT CCTGTTATGG TGATTAACAA GATTGAACAT GCGGTGCCAT TAGCGCGAGC ACTGGTTGCC GGCGGCATTA GCGTGTTAGA AGTGACTTTG CGTACACCTT GCGCACTCGA AGCTATCACT AAAATCGCCA AAGAAGTGCC AGAGGCCTTA GTGGGCGCGG GTACTATCTT AAACGAAGCT CAGCTTGATC TTGCGATTGC CGCTGGTGCG CAGTTTATTA TTACCCCAGG CGCTACAGTT GAACTGCTCA AAGCCGGTAT GCATGGTCCT GTACCATTGA TCCCAGGCGT TGCGAGCATT TCAGAAGTGA TGACGGGGAT GGCGCTTGGT TACACCCACT TTAAATTTTT CCCAGCAGAA GCTTCGGGTG GTGTGGATGC ACTGAAAGCC TTCTCGGGTC CGCTAGCGGA TATTCGCTTC TGCCCAACAG GTGGCATTAC GCCAAGCAGC TATAAAGATT ATTTAGCGCT GAAAAATGTC GATTGTATTG GTGGCAGCTG GATTGCGCCA ACGGATGCAA TGGAACACGG CGATTGGGAT CGTATCACTC AGCTTTGTAA AGACGCCATC GGCGCTTTAT AA
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Protein sequence | MLENNWSLQP QDIFKRSPIV PVMVINKIEH AVPLARALVA GGISVLEVTL RTPCALEAIT KIAKEVPEAL VGAGTILNEA QLDLAIAAGA QFIITPGATV ELLKAGMHGP VPLIPGVASI SEVMTGMALG YTHFKFFPAE ASGGVDALKA FSGPLADIRF CPTGGITPSS YKDYLALKNV DCIGGSWIAP TDAMEHGDWD RITQLCKDAI GAL
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