Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2177 |
Symbol | |
ID | 5753930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2587778 |
End bp | 2589604 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641288466 |
Product | phosphogluconate dehydratase |
Protein accession | YP_001554606 |
Protein GI | 160875290 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.318983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00331575 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACTCAG TAGTTCAAGC TGTTACCGAC AGAATTATTG CCCGTAGCAA AGCGTCACGT GAAGGTTATC TCGCCGCATT GAATGATGCC CGTAACCATG GTGTACACCG TAGCTCATTG AGCTGTGGCA ACTTAGCCCA TGGTTTTGCC GCCTGTAATC CAGACGACAA AAATGCATTG CGTCAATTGA ATAAAGCGAA CATTGGCATA GTGACGGCAT TTAACGACAT GTTATCTGCG CACCAACCCT ATGAAAGCTA TCCTGAATTG CTTAAAAAAG CCTGTCAGGA AGTCGGCAGT GTTGCACAAG TGGCGGGCGG TGTTCCGGCC ATGTGTGACG GTGTGACTCA AGGTCAACCC GGTATGGAAT TGAGCTTACT GAGTCGTGAA GTTATTGCTA TGGCAACGGC AGTGGGCTTG TCTCACAACA TGTTTGATGG CGCTTTACTG CTCGGCATTT GCGATAAAAT CGTTCCTGGT TTGCTTATCG GCGCCTTAAG CTTTGGTCAC TTACCTATGT TATTCGTGCC TGCTGGGCCG ATGAAATCAG GTATCCCGAA CAAAGAAAAA GCCCGTATTC GTCAGCAATT TGCCCAAGGT AAAGTGGATC GCGCGCAGCT GTTAGAAGCT GAAGCCCAGT CTTACCACAG TGCAGGAACC TGTACTTTCT ACGGCACTGC AAACTCGAAT CAGCTGATGC TTGAAGTGAT GGGGCTGCAG TTACCAGGCT CGTCATTTGT GAATCCTGAT GATCCACTGC GCGAAGCCTT AAACAAGATG GCCGCTAAGC AAGTGTGTCG TTTAACCGAA ATGGGTACTC AATATACCCC AATTGGTGAA GTGGTCAGTG AAAAGTCTGT GGTTAACGGC ATTGTGGCGC TCTTGGCTAC CGGCGGTTCT ACTAACTTGA CTATGCACAT CGTCGCCGCG GCTAGAGCTG CCGGTATTAT CGTGAATTGG GATGATTTTT CTGAATTATC CGATGCCGTG CCATTAGTGG CGCGCGTGTA TCCAAACGGT CACGCCGATA TCAACCATTT CCACGCAGCA GGCGGCATGG CGTACTTAAT CAAAGAATTA CTTGATGCGG GTCTATTGCA TGAAGATGTG AATACCGTTG CGGGCTTTGG TTTACGCCGT TATACCCAAG AGCCAAAACT GCTCGACGGT GAACTTCGCT GGGTCGATGG CCCTACAACA AGTTTAGATA CTGAAGTGTT GACTTCAGTC GCATCGCCTT TCCAAGGCAA TGGTGGTTTG AAATTACTGA AAGGTAACTT GGGCCGCGCT GTAATCAAAG TATCAGCGGT ACAAGAACAA CATCGTGTCG TTGAAGCGCC AGCGGTAGTC ATTGACGATC AAAACAAACT CGATGCCTTG TTCCAAGCAG GGGCTCTGGA TAGAGATTGT GTTGTGGTGG TTAAAGGTCA AGGGCCGAAA GCCAACGGTA TGCCAGAACT GCACAAGTTA ACCCCATTAT TGGGTACGCT TCAGGACAAA GGCTTTAAAG TCGCGCTGCT GACCGACGGT CGTATGTCTG GCGCGTCGGG TAAAGTCCCC GCGGCCATTC ACTTGACGCC AGAAGCCTTA GATGGCGGCT TAATTGCCAA AGTCAAAGAT GGCGACTTGA TCCGTGTCGA TGCGTTAACA GGCGAACTGA GTCTGCTCGT CTCTGAAGCT GAACTTGCCA CCAGAACCGC CGGAATAGTC GATTTACATC GGTCACGTTA TGGCATGGGC CGCGAGTTAT TTAGTGCGCT ACGTTCCAAT CTAAGCAGTC CAGAAACTGG TGCGCGTTGT ACTAATGCCA TCGATGAACT TTATTAA
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Protein sequence | MHSVVQAVTD RIIARSKASR EGYLAALNDA RNHGVHRSSL SCGNLAHGFA ACNPDDKNAL RQLNKANIGI VTAFNDMLSA HQPYESYPEL LKKACQEVGS VAQVAGGVPA MCDGVTQGQP GMELSLLSRE VIAMATAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP MKSGIPNKEK ARIRQQFAQG KVDRAQLLEA EAQSYHSAGT CTFYGTANSN QLMLEVMGLQ LPGSSFVNPD DPLREALNKM AAKQVCRLTE MGTQYTPIGE VVSEKSVVNG IVALLATGGS TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLVARVYPNG HADINHFHAA GGMAYLIKEL LDAGLLHEDV NTVAGFGLRR YTQEPKLLDG ELRWVDGPTT SLDTEVLTSV ASPFQGNGGL KLLKGNLGRA VIKVSAVQEQ HRVVEAPAVV IDDQNKLDAL FQAGALDRDC VVVVKGQGPK ANGMPELHKL TPLLGTLQDK GFKVALLTDG RMSGASGKVP AAIHLTPEAL DGGLIAKVKD GDLIRVDALT GELSLLVSEA ELATRTAGIV DLHRSRYGMG RELFSALRSN LSSPETGARC TNAIDELY
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