| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2173 |
|---|
| Symbol | |
|---|
| ID | 5753926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2582794 |
|---|
| End bp | 2584233 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641288462 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_001554602 |
|---|
| Protein GI | 160875286 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0938169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.15404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCA GAACCAAAAT CGTCACCACT CTAGGTCCCG CTACCGATCG TGATGATAAT
CTACGCCGCA TCATCGCGGC AGGTGCAAAC GTTGTACGTC TTAATTTCTC CCACGGTTCC
CCAGAAGATC ACTTAAAACG AGCCACTCAA GCGCGCGAAA TCGCTAAAGA GTTGGGCGTT
CATGTGGCTA TTCTGGGTGA CTTACAAGGC CCTAAAATCC GCGTTTCTAC TTTCAAAGAC
AATAAGAAAG TGCAACTGGT GTTAGGTCAA GCCTACGTGC TTGATGCCGA ATTAGCAAAA
GGTGAAGGCG ACGAGACCCA AGTGGGTATC GATTACAAGC AATTGCCTGA CGATGTGACT
GTTGGCGATA TCTTGATGTT AGATGATGGC CGTGTTCAAT TACGTGTTGA GCGTGTTGAA
GGCCGTAAAG TGCACACCAC AGTGACAGTG GCTGGCCCTT TATCTAACAA CAAAGGTATT
AACAAGCAAG GCGGCGGACT TTCTGCTGCG GCGCTGACCG AAAAAGACAA AGCTGACATT
CTGACTGCGG CATTGATCCA AGTGGATTAT TTAGCCGTGT CTTTCCCGCG CAGTGGTGCT
GATTTAGATT ACGCCCGTGA TCTTGCACGT CAAGCTGGTT GTAATGCCTT GATCGTGGCT
AAAGTTGAAC GCGCTGAAGC CGTTGCGACC GATGCGGCTA TGGATGATGT GATCTTAGCA
TCTGACGTTG TCATGGTTGC CCGTGGTGAC TTAGGTGTTG AAATTGGTGA TGCTGCGCTC
GTTGCGGTGC AGAAGAAGTT AATCGCCCGT TCACGCCAAC TGAATAAAGT CGTCATCACG
GCCACTCAGA TGATGGAATC GATGATTTCA AGCCCTATGC CAACCCGCGC CGAAGTAATG
GACGTGGCCA ACGCTGTGCT TGATGGTACC GATGCAGTGA TGTTATCAGC TGAAACCGCT
GCCGGTGACT TCCCAGAAGA AACCGTTAAG GCAATGGCAA ACGTCTGTGT TGGCGCTGAA
TCTCACCCAA GTGTGATTGT GTCTAAGCAT AGATTAGATG TGCGTTTCAC TTCAGTTGAA
GAAACGATTG CACTATCGAC TATGTATGCG GCTAACCACC TTGAAGGTGT TAAGGCGATT
ATTGCTTTGA CTGAATCAGG TGCGACACCA CAATTGATGT CACGCATCAG TTCTGCACTG
CCGATCTTAG GTTTATCACG TCACGCGACA ACGCTGGCTA AAATGGCCTT GTACCGCGGC
GTGTTACCAA TCTACTTCGA TTCAACTATC CACCCAGCCG ATGAGCTAGC GCAAAAAGCG
TTAGAAGCAT TAACAGCTGC AGGTTATTTG AATAGCGGTG ATATGGTGCT GATGACCAAA
GGCGATGCAA TGGAAACGAT TGGCGGCACT AACACCTGTA AAGTGTTGAT CGTAGCTTAA
|
|---|
| Protein sequence | MFRRTKIVTT LGPATDRDDN LRRIIAAGAN VVRLNFSHGS PEDHLKRATQ AREIAKELGV
HVAILGDLQG PKIRVSTFKD NKKVQLVLGQ AYVLDAELAK GEGDETQVGI DYKQLPDDVT
VGDILMLDDG RVQLRVERVE GRKVHTTVTV AGPLSNNKGI NKQGGGLSAA ALTEKDKADI
LTAALIQVDY LAVSFPRSGA DLDYARDLAR QAGCNALIVA KVERAEAVAT DAAMDDVILA
SDVVMVARGD LGVEIGDAAL VAVQKKLIAR SRQLNKVVIT ATQMMESMIS SPMPTRAEVM
DVANAVLDGT DAVMLSAETA AGDFPEETVK AMANVCVGAE SHPSVIVSKH RLDVRFTSVE
ETIALSTMYA ANHLEGVKAI IALTESGATP QLMSRISSAL PILGLSRHAT TLAKMALYRG
VLPIYFDSTI HPADELAQKA LEALTAAGYL NSGDMVLMTK GDAMETIGGT NTCKVLIVA
|
|---|
| |