Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2159 |
Symbol | |
ID | 5753909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2565500 |
End bp | 2567506 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288445 |
Product | excinuclease ABC subunit B |
Protein accession | YP_001554588 |
Protein GI | 160875272 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000173586 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAAT CTGTTTTTCA GCTTGAATCG CAATTCGCCC CCGCAGGCGA CCAACCTACA GCGATAGCCA AATTAGTCGA TGGACTCGAA GCGGGTTTAG CTTGCCAAAC CTTACTCGGG GTGACCGGCT CAGGTAAAAC CTTCACGATT GCTAATGTAA TCCAAAAGTT AGGTCGCCCC ACGATTATTA TGGCGCCCAA TAAAACCTTG GCGGCGCAGC TTTATGGCGA GATGAAAGAG TTCTTTCCCC ATAATGCGGT TGAGTATTTT GTCTCTTACT ACGATTACTA TCAGCCAGAA GCCTATGTGC CTGCATCGAA TACCTTTATC GAGAAAGATG CGTCGGTTAA TGCCCATATA GAGCAAATGC GCCTGTCGGC GACGAAGGCG CTACTAGAGC GTAAAGATGT GGTGCTCATC GCTTCTGTGT CGGCCATTTA TGGTTTGGGC GATCCCGACT CCTATTTAAA AATGTTGCTG CACCTACGCC AAGGCGATGT GATGGGGCAG CGTGATATCT TAATTCGTCT CAGTGAATTG CAGTATAAAC GCAATGATAT CGAGCTACAG CGCGGCACCT ATCGCGTGCG TGGTGAAGTG ATTGATGTTT TCCCTGCCGA TTCTGAGCGT AATGCTATTC GCGTTGAATT GTTCGACGAT GAGATTGAGC GTTTAAGCGA GTTTGATCCG TTAACCGGCC ATATCATTAA GCGCATCGCC CGTACAACGG TTTACCCTAA GACTCACTAT GTGACGCCGC GGGAAAAAAT CATTGCCGCC ACTGAGTTCA TTAAAGAAGA GCTGCGTGAG CGTAAGCAAT TTCTACTCGA TAACAACAAG TTAATTGAAG CCCAGCGTAT CCATGAGCGA GTGCAATACG ATGTGGAAAT GATGGTGGAG TTAGGTTACT GCTCTGGCAT CGAAAACTAC TCGCGCTATT TATCTGGTCG CGCACCGGGG GAAGGGCCGC CAACCTTACT CGACTATTTG CCCGCTGACG GTCTATTAAT TATCGACGAA TCCCATGTGA CTGTGCCGCA AATCGGCGCC ATGTACAAAG GTGACCGTTC TCGTAAAACC ACACTGGTGG AATACGGTTT CCGCTTACCA TCAGCCTTAG ATAACCGACC GCTCAAGTTT GAAGAGTTTG AGCAATTGAT GCCGCAAACC ATTTATGTGT CGGCGACACC GAGTGTCTAC GAGCTGGAAA AAAGCGAAGG TGAGATTGCC GAGCAGGTCG TACGGCCAAC GGGTTTACTC GATCCTGAAT TAGAAGTGCG TCCTGTCGGG ACTCAAGTGG ACGATTTATT GTCTGAAATC GCTAAGCGCG TCGCTGTTAA CGAGCGGGTG TTAGTGACGA CGCTGACCAA GCGTATGTCG GAGGATTTGA CTGAATACCT CGACGAGCAT GGGGTCAAAG TGCGTTATTT GCACTCGGAC ATAGACACAG TCGAACGGGT GGAGATCATC CGCGATCTGC GTTTAGGTAA GTTTGATGTG TTGGTTGGGA TCAACTTATT GCGTGAAGGC TTAGACATGC CAGAAGTGTC ATTGGTGTGT ATTTTAGATG CGGATAAAGA GGGCTTCTTG CGCTCAGAAC GCTCGCTTAT CCAAACCATT GGCCGCGCTG CGCGTAACGT CAATGGCAAA GTAATCCTCT ATGCCGATCG CATTACCAAT TCGATGGCGA AGGCCATTGG TGAAACTGAC CGCCGACGTG AACGCCAGCG CGCGCACAAC TTAAAGCACG GCATCACACC TAAGGGCGTG GTTAAACGGA TCACCGATGT GATGGATGTG GATGATGGCC GCGACAGTAA AGCTGTCTAT GGCAAAGTGG CAGAGCCTAA GTCCCATTAC CATAAGGCTG ATGCGACTGA GTTGAGCCAT CAAATCGATC AGCTTGAGAA GAAAATGCAC GAATATGCGC GCAACTTAGA GTTCGAACAA GCAGCGGCGA TGCGTGATGA AGTCAAGCAT TTGCGGGACT TGTTGATCAA GGCCTAG
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Protein sequence | MSESVFQLES QFAPAGDQPT AIAKLVDGLE AGLACQTLLG VTGSGKTFTI ANVIQKLGRP TIIMAPNKTL AAQLYGEMKE FFPHNAVEYF VSYYDYYQPE AYVPASNTFI EKDASVNAHI EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYLKMLL HLRQGDVMGQ RDILIRLSEL QYKRNDIELQ RGTYRVRGEV IDVFPADSER NAIRVELFDD EIERLSEFDP LTGHIIKRIA RTTVYPKTHY VTPREKIIAA TEFIKEELRE RKQFLLDNNK LIEAQRIHER VQYDVEMMVE LGYCSGIENY SRYLSGRAPG EGPPTLLDYL PADGLLIIDE SHVTVPQIGA MYKGDRSRKT TLVEYGFRLP SALDNRPLKF EEFEQLMPQT IYVSATPSVY ELEKSEGEIA EQVVRPTGLL DPELEVRPVG TQVDDLLSEI AKRVAVNERV LVTTLTKRMS EDLTEYLDEH GVKVRYLHSD IDTVERVEII RDLRLGKFDV LVGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI GRAARNVNGK VILYADRITN SMAKAIGETD RRRERQRAHN LKHGITPKGV VKRITDVMDV DDGRDSKAVY GKVAEPKSHY HKADATELSH QIDQLEKKMH EYARNLEFEQ AAAMRDEVKH LRDLLIKA
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