Gene Sbal195_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2094 
Symbol 
ID5753839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2495213 
End bp2499034 
Gene Length3822 bp 
Protein Length1273 aa 
Translation table11 
GC content50% 
IMG OID641288375 
Productexodeoxyribonuclease V, beta subunit 
Protein accessionYP_001554523 
Protein GI160875207 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR00609] exodeoxyribonuclease V, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.780628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC AGATTCAGTT AAACGCAGCG GCGTTACATT CAGCACCACA GGCGCTTGAT 
CCACTCACAT TGCCCTTTGG CGGTAGTCGT CTGATTGAGG CCAGCGCAGG CACTGGTAAA
ACCTACACGA TTTCAGGTCT TTATTTACGC TTATTGCTTG GTGATGGCAT AGCAGCGCCG
CTGACCTGTG AACAAATTCT CGTGGTTACC TTCACCAATG CAGCCACCGA AGAGCTAAGG
GATCGTATTC GCCGGCGTAT TCAAGTCGCC TTTAAGTGTT TCTTAGGGCT AACGATTGCC
GATCCCTTTG TGCAGGCATT GTATGACAAC ACACCAGAGA GTGAACGCGC CATTGCCCTT
AGGCGATTCG ATCTCGCCCT TAAATCCCTC GATGAAGCGG CGATTTTTAC CATTCACGGT
TTCTGTCAGC GAATTTTATC GGATCTCGCC TTTGAGTCTT CCTTACTGTT CGAATCGGAC
TTTACCTTGG ACGACAGCGA GTTTTTACAC CATGCGGTAC GGGATTTTTG GCGTGAGGCC
TGTTATCCGC TCCCCGATTA CTTAGCGCAA ATCATTGCCA AGGAATTTGG CGAGCCCGAT
GGGTTAGTCA AACAACTGCG GCCGCTCCTT GGCGCCAGTC AAGCAAAGCC TCTGAAACCC
GCGCTTAAAT TTGATGCCTT AGCCCTGTCA CTGCGCCAAA GTTTAGAGCG CTTTAAATTA
GCTTGGCCAC GGGGGTGCGA TGGCTTATTG GCATTGCTTC ACAGTTTGCC GCTAAACGGC
ACTCGCTTTG GCAAGGCAAC GGATAAGTAC CCCAAACTCG CCGCCATGTT CGATGCGCTG
GATAACTGGC TCGCTTTCGG TCATGGGTTG CCGCCGCTGA AAGAGTTAGA AGCCTTGTCC
TTGTCTGAGT TAAAACTCAA CAAGGGCGGC GTGATCCCAA GCGTGAGCGA AGCACCGCTG
ATGGATCATA TGGAGCAACT TGCAACATTG ATTGCCGCCA TTAAACCGGC GTTTTTATAT
AGTGCGAAAC TTGGCATAAG CGAGCGATTT GCCCAGCAAA AGCAGCAAAA AAACGTGCTG
ACCCCAGATG ATTTGCTCAC GACATTAGCA AGCGCGCTAC ATGCCAATAA TGAAACCTTG
CCCAAAGCCG TGGCGACACG TTTCCCCGTC GCGCTTATTG ATGAATTCCA AGATACCGAT
CCGCTGCAAT TTGCGATCTT CTCTGGCATC TACCAAGGCC GCTACTCGTT TGAGCAGCAA
GGCAATAACG ATACAGAAAA TAAGCTCAGC CTGTTGATGA TTGGCGATCC TAAGCAAGCT
ATTTATGCCT TTCGCGGCGC CGATATCCAT ACCTATATTG AGGCCCGTCA TCATACGCAG
GCCCACTATC ATCTGGATAC CAACTACCGC TCAAGTGCAA ACATGGTCGC TGGGGTTAAC
CATCTGTTTA GTCAGCATAA TGATCCTTTT ATTAGTCAAT CTATCCCCTT TGATAGCGTG
AAAACGCCCA GCAGTGCCAA GGGGAAAACC CTCACTGAAA AAACCACCAA TCCAGCCGCC
TTAAGATTAA GACTCTTAAG CGAAAGTACA GAAAACGGCC TCAACAAAAC CACGGCAAGA
CACTTACTCG CCGAAGATGC AGCAGCGGAG ATCACCCGTT TACTGACAGA TGCGGCCAAT
GGTGAGTGCC ACAGCCCAAA CGGACCTTTG ATCGCTAAAG ACATCGCCAT CTTAGTGCGG
GATCGCAACG AAGCGGCGGT GATGAAAACA GCACTGAGTA AACGTCACAT AGGCGCAGTG
TTTTTAAGCC GCGACAGTGT GTTCGATACC CTTGAAGCGC GGGAAATGGC GTTAATTTTA
CGATCTCTGG CGAATCCTAA GGATGAACGG GCATTGCGCA GCGCCCTAGC CACAGCATTA
TTAGGCTACA GCGCCGAGCA AATTCATGCC TTTAACCAAG ATGAAGAGCA CAGACAGCTG
TTATTAGAGC AGTTTTTTAA CTTGCACCAA GTGTGGCAAA AACGCGGCAT CATGCCCGCG
CTACTCAGCC TTGCCAATAG CACTAAACTA ATTGACCGTT TACTGCACAC CGCCAGTACG
CAAACCGATG CACAGGAGCA AGATGCCACG AATGGCGAGC GTCGCCTGAC GGATTTTCGC
CACCTTGCTG AGCTATTACA GCAAAAGGCC ACCGAGCTTG ATGGTATTAG CGCCCTGCTC
AATTGGTATG AACAGCAACT GATTGATAAC ACAGGCACCG ATGAACAGCA GCTGCGCCTC
GAAAGCGAGC AGAATCTAGT GCAGATCGTC ACTATCCATA AGAGTAAGGG CCTTGAGTAT
CCCGTATGTT TTGTGCCCTT TGTTAGCCTA GCCCGCGACA ATCGCCGCCG CCCGACGCCT
ATGCTGTACC ACAGAACCAA TGACGCAGGT GAGCAAGAAC TAGTATGGGA TATCGAAGGC
ACGGATGAGG GTTGGGAGCG CGCCAAACAA GAAACCTTGG CCGAAGACTT GCGCCTGTTA
TATGTGGCGC TCACTCGCCC TGTTTATTTG TGTTACTTGT ATATCGCCAA TCACAGTCGT
CAGCTTAAAA ATGGCCTTAA AAGTCAGCTG CATGAAACCG CCATCGGCTA TCTGCTCGGC
ATAGGCGACT CAGAATGTGA CTTTGCCCGT ATCTGCAATG CAGCGCAGCA GCTCGCCCAA
GATGTGGAAG CCATAAGTAT TGATAAGGTG CCCGATGACA TAGACGAGCG TCCATTGCCC
TCAAGCCAAG ACATAGCACA AATACTGAGC GCGAAAACCT TAACCCGCCA ATACTGCACG
CCGTGGCGAG TCGGCAGTTA TTCAGGCCTA GTTAAAAATA CCAGCCATGG TAAAGCCGCT
CCGGGCGCCG ATGATGAAGC ATTAGGTACG CTTGAATATA TGGCTGCGCG AACACTCTCT
ATTCCTGATG AGCCAAGTCA TGAGCTGCAG GATGGCATGC TCAATCGCTT TAACTTTGAG
CGCGGCGCCA ATGCCGGTAG CTTTATGCAT TTAGTGCTAG AAGAGATTGA TTTTACGCAG
GCAGACAGAG ACTTACCGCT GCAACTGCCT AAAGCCATGC TGAAATACGG CATCGCACCC
GAGTGGCAAA CGGTATTGCA CACTTGGTAT CTGGATATGC TGCATGCGCC GCTTGGGCTC
ATGCCATCAA CAGTGCAATC ATCAACAGTG CCAACGACAA TGCCTTCAAC ATCGGCCTTA
GAGAATCATT CCAAAACGCC CAAACCTGAA CATCCTGAGC TGTGCTTAGC CAAGTTATCG
CCGCAGGATA CCTTAGTCGA AATGGAGTTT TATTTACCCC TAAGCGAGCT TAAAGATACT
GAGCTCAATG CGCTACTGCA GCAGTTTGGC TATGAGTCGA CACTTAAGTT TGATGATCTC
AAGGGCATGC TCAAGGGCTT TATCGATTTA ACCTTTGAAT ACCAAGGAAA ATATTATATC
GCCGACTATA AGTCGAATCA TTTAGGCGAC AACATCAATG CCTATCATCA GAGCGCGCTG
CAAAGTGCCA TAACCGATCA TAGGTACGAT TTGCAGTACA TTCTCTACTC ATTGGCGCTG
CACAGATATT TGAGTTTACG CCTGCCAAGT TATGACTACG ACAGCCATAT CGGCGGTTGT
TATTACTTGT TCTTACGGGG AATGTCGGCT CAGTATCCCG GCTACGGTGT TTATTACGAC
AAGCCGCCGA AGGCACTTAT TCTCGCGCTG GATTCACTAT TTAATGACAA TTTATTTCAC
AGCAGATTAG CTGGTGCAAT CGATACAGGA GTCACGGCAT GA
 
Protein sequence
MSEQIQLNAA ALHSAPQALD PLTLPFGGSR LIEASAGTGK TYTISGLYLR LLLGDGIAAP 
LTCEQILVVT FTNAATEELR DRIRRRIQVA FKCFLGLTIA DPFVQALYDN TPESERAIAL
RRFDLALKSL DEAAIFTIHG FCQRILSDLA FESSLLFESD FTLDDSEFLH HAVRDFWREA
CYPLPDYLAQ IIAKEFGEPD GLVKQLRPLL GASQAKPLKP ALKFDALALS LRQSLERFKL
AWPRGCDGLL ALLHSLPLNG TRFGKATDKY PKLAAMFDAL DNWLAFGHGL PPLKELEALS
LSELKLNKGG VIPSVSEAPL MDHMEQLATL IAAIKPAFLY SAKLGISERF AQQKQQKNVL
TPDDLLTTLA SALHANNETL PKAVATRFPV ALIDEFQDTD PLQFAIFSGI YQGRYSFEQQ
GNNDTENKLS LLMIGDPKQA IYAFRGADIH TYIEARHHTQ AHYHLDTNYR SSANMVAGVN
HLFSQHNDPF ISQSIPFDSV KTPSSAKGKT LTEKTTNPAA LRLRLLSEST ENGLNKTTAR
HLLAEDAAAE ITRLLTDAAN GECHSPNGPL IAKDIAILVR DRNEAAVMKT ALSKRHIGAV
FLSRDSVFDT LEAREMALIL RSLANPKDER ALRSALATAL LGYSAEQIHA FNQDEEHRQL
LLEQFFNLHQ VWQKRGIMPA LLSLANSTKL IDRLLHTAST QTDAQEQDAT NGERRLTDFR
HLAELLQQKA TELDGISALL NWYEQQLIDN TGTDEQQLRL ESEQNLVQIV TIHKSKGLEY
PVCFVPFVSL ARDNRRRPTP MLYHRTNDAG EQELVWDIEG TDEGWERAKQ ETLAEDLRLL
YVALTRPVYL CYLYIANHSR QLKNGLKSQL HETAIGYLLG IGDSECDFAR ICNAAQQLAQ
DVEAISIDKV PDDIDERPLP SSQDIAQILS AKTLTRQYCT PWRVGSYSGL VKNTSHGKAA
PGADDEALGT LEYMAARTLS IPDEPSHELQ DGMLNRFNFE RGANAGSFMH LVLEEIDFTQ
ADRDLPLQLP KAMLKYGIAP EWQTVLHTWY LDMLHAPLGL MPSTVQSSTV PTTMPSTSAL
ENHSKTPKPE HPELCLAKLS PQDTLVEMEF YLPLSELKDT ELNALLQQFG YESTLKFDDL
KGMLKGFIDL TFEYQGKYYI ADYKSNHLGD NINAYHQSAL QSAITDHRYD LQYILYSLAL
HRYLSLRLPS YDYDSHIGGC YYLFLRGMSA QYPGYGVYYD KPPKALILAL DSLFNDNLFH
SRLAGAIDTG VTA