Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2088 |
Symbol | |
ID | 5753833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2486296 |
End bp | 2487510 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288369 |
Product | Fmu (Sun) domain-containing protein |
Protein accession | YP_001554517 |
Protein GI | 160875201 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATT CTCCGCTTTC TGCCAGCTCG AACGAATTAG TGATCAGTAT CTTAACTATG GTGCTGAGCC AAGGGAAACC CTTAGATCGG GCCTATTCTC AGCATTTTTC TGGGTTGCAA TTGGTACCCG CCGAACAGGC GCGTATCGCA TTAACGACGG GTGATATCCT ACGTCGCTTA AATTTATATT GTTATCTGGC GGAAATCAGT CCAGATGAGA TGGAGCGTTT TGGCTCTAAA TTGCTTAATG CGTGGCATTT ATTCCACGGG CTTGAATTGC CTAAAATGCA ATATTCGCTG CAAGTCGATG AGGCGCGTTT AGCCGAGCGC ACCGAGCAAG CGAAAACTAA GCCAGTACTG TGGGACGGTT GCCCTGAGTG GCTCGATGCG ATGGGCCGTG AGCAATTAGG CGAGTCTTGG GAAAAGGAGC GCGCCGCGTT AAGCACAGCG CCGAAGCGTT TTTTACGCGC AAATGGCCTT AAAGTGACGC GTGAGGAATT GGCCGCTAAG CTTGCCGCTG AGTTTGTGAG CACGCTGAGC GTTGATGGGG TCGATTCTGC CCTTGAAGTG ACCTCCGATT CTGCCTTGTT CCGTACCCAA AGCTTTAAAG ATGGCTTATT CGAGCAGCAA GATGCGGGCT CTCAGCGCGT GGCGGCGGCG CTTGATGCCA AGCCAGGCAT GAAAGTTATT GATGCTTGCG CAGGCGCGGG TGGCAAAACC TTACACATAG CCGCGCAAAT GCAGGGTAAA GGGCGCTTGT TGGCCATGGA TGTGGAGCAA TGGAAACTCG ACAAACTCAA AGAGCGTGCT CGTCGCAATG GCGCGCACAA TGTCGAAACC CGCGTGATTG TCAGCAGTAA AACCATTAAA CGCTTAAAGC TCAGTGCCGA TCGGGTATTA CTCGATGTGC CATGCTCAGG TTTGGGCGTA TTAAAGCGTA ATCCAGATGC AAAATGGCGC GATACTGTTG AGCGTTTACC TGTGTTAATG GAGCTGCAAA AGCACATTTT GACCAGCTAC AGCCGCATGG TGAAGGTTGG TGGCATAGTG GTTTATGCGA CCTGTTCAAT CTTCCCCTGC GAGAACCGTG GTCAAGTCGA TGCGTTTTTA GCCGAGAATC CTAATTTCCG CCTGATTGAG GATGAAAGTA TCAGCCCAGC CGATAGCGGA TTTGATGGTT TTTACCTTGC AAAACTTGAA CGTATTCAAG AATAA
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Protein sequence | MLNSPLSASS NELVISILTM VLSQGKPLDR AYSQHFSGLQ LVPAEQARIA LTTGDILRRL NLYCYLAEIS PDEMERFGSK LLNAWHLFHG LELPKMQYSL QVDEARLAER TEQAKTKPVL WDGCPEWLDA MGREQLGESW EKERAALSTA PKRFLRANGL KVTREELAAK LAAEFVSTLS VDGVDSALEV TSDSALFRTQ SFKDGLFEQQ DAGSQRVAAA LDAKPGMKVI DACAGAGGKT LHIAAQMQGK GRLLAMDVEQ WKLDKLKERA RRNGAHNVET RVIVSSKTIK RLKLSADRVL LDVPCSGLGV LKRNPDAKWR DTVERLPVLM ELQKHILTSY SRMVKVGGIV VYATCSIFPC ENRGQVDAFL AENPNFRLIE DESISPADSG FDGFYLAKLE RIQE
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