| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2071 |
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| Symbol | def |
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| ID | 5753816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2464915 |
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| End bp | 2465406 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641288353 |
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| Product | peptide deformylase |
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| Protein accession | YP_001554501 |
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| Protein GI | 160875185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.159605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0359728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGTAC TCGATATTCT AACAATTCCC GATGAGCGCC TTAAACGTAA AGCGCAACCT
GTAAAAGATA TTGAAGCTGT TCAGGGATTT ATCGATGATT TAATCGAAAC CATGTATCAC
ACGGATGATG GTATCGGTTT AGCGGCAACG CAAGTCGGCA GTACGGATGC AATTATTGTG
ATCGATTTAT CTGACGGTCG CGACCAACCT CAAGTGCTGA TCAATCCTGA AATTGTCGAA
AAGTCTGGCG AGTTTGTGGG TGAAGAAGGG TGTCTGTCGA TCCCCGGTTA TCGCGCTAAA
GTGTCACGTT TTGAGAAGGT CAAAGTGACC GCCTTAGACA GAACAGGCAA GGCTATTGAA
ATCGAAACCG ATGAGTTTTT AGCCATAGTA TTACAGCATG AAATCGACCA TTTACATGGC
AAAGTGTTTA TCGAACATTT ATCCATGTTA AAACAACAAA TTGCGCTTAA AAAAGTGCGT
AAATACGCTT AA
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| Protein sequence | MAVLDILTIP DERLKRKAQP VKDIEAVQGF IDDLIETMYH TDDGIGLAAT QVGSTDAIIV
IDLSDGRDQP QVLINPEIVE KSGEFVGEEG CLSIPGYRAK VSRFEKVKVT ALDRTGKAIE
IETDEFLAIV LQHEIDHLHG KVFIEHLSML KQQIALKKVR KYA
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