| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2040 |
|---|
| Symbol | |
|---|
| ID | 5753784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2420751 |
|---|
| End bp | 2422007 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641288321 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_001554470 |
|---|
| Protein GI | 160875154 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.939043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0886472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCCT TGGTTGACGC CAACAGTTTT TATTGCAGTG CCGAGCAGGT ATTTAGACCT
GATTGGCGTG GTAAGCCAAT GATTGTGTTG AGCAACAATG ATGGCTGCAT CGTGGCGGCA
AACAAGCAAG CGAAAGAACG GGGTGTTCCT AAGTTTGCAC CATACTTTCA GGTCAAAGAC
CTGTGCACGA AATTAGGTGT CATTGTTTGT TCAAGTAACT ATGAGCTCTA TGCCGATTTA
TCCGCAAAGA TGATGAATAT CATTGGCCGA TTTGCACCAG AGCAGCATGT CTATTCGATT
GATGAAAGCT TTCTCTCCTT TAAAAATTGT TACCCCGCCA TTAAGTGCTT ACAAGCCCAA
GGCCAGTTGA TTCGAAAAGC GGTTTGGAAA GAGACACGTT TGCCGGTTTG TGTCGGTATC
GGCTCAACAC TCACACTGGC TAAAGCTGCA AATCATGCGG CAAAGAAGTT ACCTGGCTAT
CAGGGTGTGT GTGTTATCGA TAATGAACAA GATAGGATTT CAATTTTACA ATCAATGAGT
GTGAATGATG TCTGGGGCAT TGGGCGCAGG ATAAGCAAAA AACTTGAATT GATGAACGTC
AAGACCGCCT ATGACTTAGC CAAAATCCCT GCAGGTTTAG CGCGGAAGCA ATTTAGTATT
GAAATAGAAC GCACTGTGCG TGAACTTAAT GGGCAAGCGT GCAAAGTGTG GGACGAGGCG
AGGGCGGATA AGAAACAAAT ATTCTCAACT CGTAGTGTGG GCGAGCGTAT TACCGAGTAT
GAAGATTTAC TGCAAGCCTT AAGTAAACAT GTGGCGATTG CTGCAGCGAA AGCGCGCAAG
CAAGGTTCAA GCTGTAAAAC CATGTTGTTG TTTGCTAGCA ATTCTCCCTA CGATGAACGC
CCAACAGGCT TTAAGACCTT AGTGCACTTT GCTTGTGCCA CCGATTGCAG CATTGAACTC
ACTCAAGGTA TGACACAAGC AGCATCTCAA CTTTTCCGTG CCGGTGTACG TTATTATAAA
GTCGGTGTAG GTCTGATTGA TTTGGTCAGC ACTCAGCATG ACCAGTTAGA TTTATTCAAT
GTCTCAAAAG CCAAGCCAGC GTTAATGAAG ACCCTCGATG GCATCAATCA ACGTTATGGC
ACAGACACCT TATTCATTGC AGCCCAAGGT ATCGAGCAAA AATGGGCCAT GCGTCGAGAC
CTGCTCTCAC CACAATACAC AACCAAGTGG CATTGTCTGC CTGAGATAAA GTGTTGA
|
|---|
| Protein sequence | MFALVDANSF YCSAEQVFRP DWRGKPMIVL SNNDGCIVAA NKQAKERGVP KFAPYFQVKD
LCTKLGVIVC SSNYELYADL SAKMMNIIGR FAPEQHVYSI DESFLSFKNC YPAIKCLQAQ
GQLIRKAVWK ETRLPVCVGI GSTLTLAKAA NHAAKKLPGY QGVCVIDNEQ DRISILQSMS
VNDVWGIGRR ISKKLELMNV KTAYDLAKIP AGLARKQFSI EIERTVRELN GQACKVWDEA
RADKKQIFST RSVGERITEY EDLLQALSKH VAIAAAKARK QGSSCKTMLL FASNSPYDER
PTGFKTLVHF ACATDCSIEL TQGMTQAASQ LFRAGVRYYK VGVGLIDLVS TQHDQLDLFN
VSKAKPALMK TLDGINQRYG TDTLFIAAQG IEQKWAMRRD LLSPQYTTKW HCLPEIKC
|
|---|
| |