| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2031 |
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| Symbol | |
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| ID | 5753775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2404339 |
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| End bp | 2411547 |
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| Gene Length | 7209 bp |
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| Protein Length | 2402 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641288312 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001554461 |
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| Protein GI | 160875145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.063176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCAC TGTGGACGCT GCGCCGTAAA TCATCTTTTG CCGCTTTTAT GTTATTGCTT
GGACTGGTAT GGCTAACACC GAGTTATGCG GCGTTGACGA AACCGAAGGT TGAGATAGAC
CCAGTATTAC CAAACATTCC TTTACCTGTG GATGCACCGA CTCTTTCCGG CAGTCGATTT
ACGTCAATTG TCGAATTACG ATGGGGGATT GATTGTTCCG TCACTGCCGT TAATATCCAG
GAGTCACTTG ATGGCAGCGC TTGGACGAAT GTATACAGTG GATTGGGCCA AGCTGATAAT
GGTGTTGTAG CCTATAAATC GTTTGCTGTT GGTGGCACGG TTTGTTCTGG TGGCTGGTCT
TGGAAACGAA TATTACAGTT ACCCAACAAG ACTCTCTCTA GATATTACTA CCGAATCAAT
GCTTGTAAAG GTTCATTGTG TAGCGCTTAT AGCCCCTCTA TTCTTGTTGG CAACCCTTCT
GCGCCGACAA CTCCAACGTC ACCAACTTCG ATCTCCGCAC CTGCAACCAA TGCAACTGGA
GCCTTTAGTG TTTCTTGGTC GAGCGTCAGT GGTGCTGCGC GTTATGAGTT ACAGCAACGA
GTGAATGGTG GCGCTTGGGT CGCTAAGTAT TCAGGAACGG CCACAAATTA TGCGTTGTCG
GGGCTCACTT CTGGCACTTA TCAGTATCAA GTGCGTGCTT GCACTACAGC GTGCAGTGCT
TGGAAGTTAT CGAGCAATAC GCAGGTCACT TTGCCCGTTA CTGGCAGTGA TTGGAAAAAT
CTATCTCGGG TATCGGTTGC GGATGCAGGT GGCAGTGACA CAGCACCTTC TGATGCTGTA
GACCTCAACG CCGCATCGGT TAAAGGGCAA GCTGGCGTAT CGGGTGGTCA AGCAAGTTAT
CAAATTCCCA TCGATTTACC GCCAGGGCGT AATGGCGTTC AGCCTTCAGT ATCGCTTAGC
TATAACTCCC AAGGGGGGAA TGGCATTTTA GGTGTGGGTT GGTCACTCAA TGCAGGGTCA
AGCATTAGTC GCTGCGGTGC AACCTTTGCC CAAGATGGCT TTACCCGTGC AGTCACCTTT
AGTGCCTCAA CTGATCGATT GTGCCTCGAT GGTCAGCGTT TGATTGCTAC TACTGGTAGT
TATGGTGCAA GTAATGCCGA ATATCGTACT GAGATGGATT CTTTCGTTAA AGTGGTACAA
CAGGGCAATA TCAATGACAG TAATAGTCGT TTTACTGTCT ATAAACCTGA TGGAAATTCA
GCAACCTATG GTGCAAATGC TAATAGTCGT TTTGTGCCGA GCGGTTTAAG TACTGCACTA
AGCTGGAAAG TGACTCAAGA GTCGTACTCA GATGGTGCTA ATACAATAGA TTATAAGTAT
GACGACTCGG TCGCAGGCGA GCACCTTCTA AGTCAGATTT TTTATACGGG TGGAAATGGT
ATTCTAGGCG ATCGTAATGT CGAATTTATA TACGAACTGC GACCAGATGA ATCTCATCTT
TATTTAGGCG GAGGAAAGAT ATCAAGTTCA CATAGATTGA CTTTTATTAA AATATATAAC
AGTTCGAATT TGGTTGTAAG TTATGGTGTC CGTTATATTG TTAGCGATAA TAGTAATCGG
AGTTTATTGG AGTTTATTGA AAGTTGTGAT CGCAAAGATA ATTGTTCAAG TGGAAGTCAT
TTTGGGTGGT TTGATGGTAA AGCTAAATTT AAACTTGAGC CAACAGGTTT TACTAGAGAT
GGTAATTTCC AACGAACTTA TAAAGATAAA GTAATTATTG AAAGTATTAT TCCTAGTGGT
GACTTTGATG GTGATGGTTC GTTGGATTTT CCAGAGTACA ACACAAATGC GGAAGGGGAA
TATACTAAGG GTAATAGCAA TAGACTTGAC TCTTGTATTT TGGATACTAG TCTGCAAATG
TTTCATTGCG TTAGCCCTGA TATAGATAAT GATGGACGCA CTGATAGGTT GTCAGTAGCT
GATGATGAAA CACTGGTTGT TAATTATGCG GATGGAAAGG TTGTCAGAAC AAAAATAAAA
TTAAAGCAAA GTGATCCAAC TCAGGGTAGT TATGGAAATA AAGTGGATTT TGTTCGATAT
TCTGGCGATT TTAACGGTGA CGGTTATATT GATTTAGTTG TCTCAAAGGT ATTTGATTAT
AAGTTAAATA GACGAAATTT CTATCTGTAT CTGCACAATA AAAATCCTGA ACAACCTTAT
GATGACACAG GTGTGTATCT AGGTTGTGGT CTGTGTTTAG TTGAAGATAA CAGAGGGCGA
AACCGTAAAA TTGGTACTAC GACATTAGAA TTTCCAGGTG ATATAGATGG AAATGGCTTG
CCTGATATCG CTGTCATGAA TCATTGGAAT CAATTGGAGG TCGGCACTGT ACAGGGGAAT
TCTTCATTTA TAGAAATTGA TGAAGTATAT GTTGATTCTG TAAAGTTGAA TCAGTCAATG
TCGACAGTTT TGTTTTCAAA CTTAAATGTA TCTTCATTAA ATAATGAACA CAGCTATTCA
TTTTTCGCTG ATGTTACTGG TGATTCGCTT CCTGACTTAT TAGATTTGTC AAATGGATTT
GTTAGGGTTA ATAAAGGTGG CTCTTTTTCT GAACCAAAAA AAAGCTTTAA GCTGCCTAGT
GTTGAGTGGT TGCAATATTC TCCTGATGGT CATGAGTTAC TTGAAGGGAA TAAATTGTAT
TTTAATGATG CTATGTTAGT TTATGATATA GATTCAGATG GTTCTGTAGA TCTTTTGGTG
CCAGATAAAG TAGCCGTTGC TTCATGTGCA AAAATATGGG AGTTTAAGCA CGGTGGTGGA
AGTAACCCTA ATCAGACTAT GACACCTAAA ACTCTATGTG GTAGGGATAT TTATGGAACC
TATAAGTCTG ATCCTTATGA TTACAACGTT CGATCTCCTA TACCTTGGGA TATAAAAGAT
GAGAGTTTAT ATTATTTAAA AAAGATAAAT TTAAAACTTA CAGACAATGA TGATATTGTT
ATTAGCGAAG AGAATACTGA TTTTATTTCC TCCGCGCGCA AAGCTACGGT TGTAGATGTG
CATGGTAATG GTACGCAAGA CTTATTATTT ATGTATGGCA GCCGTTATAG CAACCCTAAA
GAAAATACTT ATAATTGGTA TCCATCAGGT GCTGCAAATG GTACACCGTT CAGTGGCAAA
GATTATGGTG CGTATTTCTA TCGTAACTAT GGCTCAGGTT CAGGCGCTTC TGGTAGCGAT
TACCAACCAG TAGATTATCT ACAATCTGTT ACGGATGGAT TGGGTAATAA CAGTGAGTGG
CGTTATCGCC CACTGTCAAC CGGAGAAGGT AGCGCCGGAC AATCCAAACT CTATACAACC
GACCATGATG AAGTTGGTAC TGGTTATGTC CATTTTGCCT CCAGTATGTA TGTGGTGCAG
TCCTTTAAAC AAAGCAACGG ACAGAGTGGC GAAAATGAAA CCCAATATGC CTATAAAGGC
GCGATGTATC ACCTGCAAGG GCGTGGTTTT ACCGGATTTA ATCAAATCTG GGAAAAGGAT
ATGCAGCGGG ATAAGACGGT GCATAGTGTC TTCAAGCAGA AGTTCCCTGA GGTGGGATTG
CTAACTGAGC AAACGGTCAG CGTGGGCTCG ACTACCGTTA ACCAAGTGAA TAACACTTGG
GCAGATAATC CACAACACAC CATAAGCGGT GTTTATCACA ATATTCAAAC CCGTTCGCTA
CAACAGAGCT GGGACTTACA AAGCACGCCT TTATCAACAC AAGAAGTGCA AATAAGTGCC
AGTGATGTTG ATTCATCGGG CAATATTAAA AAGCAAACTC AAAAACTGAC CGATTACATT
AAGGGTCAAG CTAACACCTA TACCAGTACC ACTGAAACCA GTTTTGCCGT TGATACCAGC
AACTGGTGGC TTAACAAATT TAATGAGATA CGCACCAGCC ACGATACCGT TCAGCGCGCT
TGGGGAGATG ATCCTGTAGG CACAAATGAT AAAGCCCAAT GGCAACTCCA AACGGTGAAT
ACGTGGGACG ATGTGCATAA ATTGCCCACG CAAGTGACTT ATACTGCCAG TAACACCAGT
TGTAATCGCG TCGAGCAAAC CGGCTTAAAC AGCTATGGTT TACCGCTCTG GACTAAAAGT
ACAGGGCAAA GTAGTGCGTG TACTGCCATC ACGGCGAGAC AAAACAACTT TACCTACACC
AAAGACGGTA AAACTCAAGT TGACGATGGC TATCTGCCTT ACAAAGTTAC CAATGCCAAA
GGTTATATCA CCACTACCGA ATACGATATG GGGCTAGGAC TTCCCATTAA AGTGGTCGCG
CCCAATAATA TCGTGACCCA AACCGAGTAC GACGGTATCG GTCGTCCAGT ACAAATGCAG
CAGACGGGCA GTCCGACACG TTATCTGCGT TACTTACTCG CGAATGAAGG TAATAACGCT
CCACAGGATA ATGATAACGT TCCCGTTGTG ATGACCCGCA CGAGTGGGGC GGGGATGCCC
GAGAGTGAGC AGTATTTTGA CGGTCAAGGC CGATTACTGC GCACCGCCAC GCAAGGTTTT
GATGGCGGTT ATCAATACCA AGACAAGCAT TATGATGCGT TAGGGCGCAT GACCCGAGAT
TCAACGCCCT ACGGTAATGG CACCGCTGCC GACTATACCG AGTTTAGTGA CTTTGATGCG
CTCGATAGAC CTATCAGACG CACGATTCCT AATGGTCGTT CCGGCGGGCT GGAGTCGATT
TATACCTATA ATGGCCTGAC AACCAATATT AATGTTGAAG GTCGCACTAT GTCGCGCACC
TATGGCAGTC AAGGTTGGTT GTATGAAACG GTGGATGCGC AAGATGGTAC CAATCGTTTT
GCTTATGATG GTGCGGGCCG TCCTTTAGTC ATACGCGATG CCAATAACCG TGACATTAAA
GCCACCTACA ACGGTTTTGG ACATAAAACG CAGGTAATAG ACCCTAACCA AGGCACCACA
GTCTTTGGGT ATAACACCTT AGGTGAGCTT GATAAGCAAA CCGATGCCAA CGGTGTGGTG
CAAACTTATG TGCTTGATGT GCTGGGTCGT ATCACTAGCA AAACCACTAC AGGCGGCAGC
GCGCCCGGCC AGGCTGTTTT TTATTGGGAT GGTAATATTA ACAACGATGC AAAAATAGAA
ATTATTGGTC AGTTAGGCTT ACTCACCTCT GAAACCGAAA ACGGCGTCGC TCGCACTTAT
GCCTATACGA CTGCGCTGCA ATTGGCGCAA ACCACCGTTA CCGTTGATGG TGTAAGCCGT
ACGGTTAAGC ATCAATACGA TAGCTTCTAT GGTCGTCCCA AAGCCTTGGA ATACCCCAAT
GGTTTGACTC TTAAATATGG CTATAACGAT TACGGCTACC TTGAGCAGAC CAGCAACGCT
GCCTCCGGCT ATTTGTATCG TCAAATCACG GCTATGGATG AGGCTGGCCA TATTACCGGC
GCTAGCCTAG CCAACAGAGT GATGTCTGAG TCACGGGTTT ATTACAGTGA AGGCACAATG
TCGAGTGTGG AAGTGGATGG GCCATTAGGC CTGATTCACG GTCATTACTA TGACGGTTAC
GATGACTTTA TGAACCTCAC CAGTGAGCGT AATGGTGTCA CAGGGCTAGT CAAAAGTTAT
CGTTATGACA GCTTGAATCG ATTGGAAGAA TACCAGTTTA ATAATACCAA TCCGAACTTC
ACCGCCACGG TCAATTATGC CTATGACAAA GTAGGGAACT TCCTAAAGAA GACCGATTAC
AGTGCTAATG CCACTAATGC CTATCGCTAT GGAGGTAATG CTGGCTGCGC AGCTAACAGT
AATGCAGGCC CCAATGCGGT ATGCCAACTG AATAAGCTCA ATGGCTCAAC AGTTAACTTT
CAATATGATA AACGTGGAAA CCTGCGTGTG GGTGACGGTT TAACCATGAC CTATAATGCC
ATGGATAAGC CGCTGACTAT TTCAGGGAGG GGGCCGAACA ATAACACCCT AACGGCTTTT
GTGTATGGCA GCGATAGTAT GCGGGCCAAG CAAAGTCGTA CAGTGTCAGG CAGCGCAACC
ACTACCTATT ATGTCGATAA GTATTATGAA ATCGATAATG ATGGCAGCTG GCGTGCCTAC
CTCGATGACA TTGCAGTGTT AAGTTACACT CCACAGCGCA GCCATTTACT GCAGTTCACT
TTGCGAGATA GGCTGGGCAG CGCGACGACC ATGGCAGACC AAAACGGTAA TATTGTCAGC
CAGCGTTATT TTGACCCTTT TGGGCGCACA ACGGACCTTG GATATAATCA TAAGCTGGAT
ATTCAGAATA AGAATACCTT GTTATCCCAG CTGCAAGATT TAGCTGTGAC CAACAAAAAC
CGCCGTGGTT TTACCGACCA TGAGCACTTG AATGAACAGC AGTTAATTCA TATGAACGGC
CGGGTGTACG ATTACAACCT GGGTCGGTTT ATGTCGGTGG ACCCGTTTAT TTTTGATTTG
AGCAGTACGC AATCAATTAA CCCGTACTCG TATATCTTGA ATAATCCGCT GGCGGGAACA
GACCCTACAG GTTACAACCC CATTTTAGAT AACAGGGCAA TGAATTTTTC AATAACAGCA
ATGACGTCCA CTGGTACTTT ATCTGATGAA CTGGTAGATG TTATCGTTCA GGCTGAATCA
AGTATTGGTA ACTCTGAAGC TGGCGGTGCT GCTGAAACAG GTAAACTTAT CAGACAAGCT
GTTATTGCAG GTAGTTTTGC TGGGTTAGCT AAAATTGCTG AAAAAGCAAT TGATAAATCG
AGTAAAAAGT CAGGTAACAA ACAAAGCTCG AAAACTAAAA GTAATGGTTC AAACTCTCAA
ACCAAAGCAG AAAATGGTAA AGTATCTGAA ATCGGCAAGC CGTCTTCAGA TAGAGCTGGA
GGCAATTCTA ATATACAAGG ACCACCAGAT ATGGTTAGAG GAGAAACTGA TGGAAGACAT
GAACCAGATG GAAAACCAGG TCCTAGAGTT AAAGTGACTT ATCCTGACGG TGCTGAGAAG
GATATAACTT CTGAAAGGGT AAAGGAAAAA ATAGTAAATG CTCACCCAAA TGCTCGCTCT
AAAGATGGTT CTGTACCAAA AAACGACGTC AAAAAAATGG AGAACTCAAT AAATAAAGAT
GGTTCAAAGA GGGAACCTGA CGAGTTCGAA AGAGAGCTAT TAAAGAATAA GTCGATTAGG
AAGGAATAA
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| Protein sequence | MLPLWTLRRK SSFAAFMLLL GLVWLTPSYA ALTKPKVEID PVLPNIPLPV DAPTLSGSRF
TSIVELRWGI DCSVTAVNIQ ESLDGSAWTN VYSGLGQADN GVVAYKSFAV GGTVCSGGWS
WKRILQLPNK TLSRYYYRIN ACKGSLCSAY SPSILVGNPS APTTPTSPTS ISAPATNATG
AFSVSWSSVS GAARYELQQR VNGGAWVAKY SGTATNYALS GLTSGTYQYQ VRACTTACSA
WKLSSNTQVT LPVTGSDWKN LSRVSVADAG GSDTAPSDAV DLNAASVKGQ AGVSGGQASY
QIPIDLPPGR NGVQPSVSLS YNSQGGNGIL GVGWSLNAGS SISRCGATFA QDGFTRAVTF
SASTDRLCLD GQRLIATTGS YGASNAEYRT EMDSFVKVVQ QGNINDSNSR FTVYKPDGNS
ATYGANANSR FVPSGLSTAL SWKVTQESYS DGANTIDYKY DDSVAGEHLL SQIFYTGGNG
ILGDRNVEFI YELRPDESHL YLGGGKISSS HRLTFIKIYN SSNLVVSYGV RYIVSDNSNR
SLLEFIESCD RKDNCSSGSH FGWFDGKAKF KLEPTGFTRD GNFQRTYKDK VIIESIIPSG
DFDGDGSLDF PEYNTNAEGE YTKGNSNRLD SCILDTSLQM FHCVSPDIDN DGRTDRLSVA
DDETLVVNYA DGKVVRTKIK LKQSDPTQGS YGNKVDFVRY SGDFNGDGYI DLVVSKVFDY
KLNRRNFYLY LHNKNPEQPY DDTGVYLGCG LCLVEDNRGR NRKIGTTTLE FPGDIDGNGL
PDIAVMNHWN QLEVGTVQGN SSFIEIDEVY VDSVKLNQSM STVLFSNLNV SSLNNEHSYS
FFADVTGDSL PDLLDLSNGF VRVNKGGSFS EPKKSFKLPS VEWLQYSPDG HELLEGNKLY
FNDAMLVYDI DSDGSVDLLV PDKVAVASCA KIWEFKHGGG SNPNQTMTPK TLCGRDIYGT
YKSDPYDYNV RSPIPWDIKD ESLYYLKKIN LKLTDNDDIV ISEENTDFIS SARKATVVDV
HGNGTQDLLF MYGSRYSNPK ENTYNWYPSG AANGTPFSGK DYGAYFYRNY GSGSGASGSD
YQPVDYLQSV TDGLGNNSEW RYRPLSTGEG SAGQSKLYTT DHDEVGTGYV HFASSMYVVQ
SFKQSNGQSG ENETQYAYKG AMYHLQGRGF TGFNQIWEKD MQRDKTVHSV FKQKFPEVGL
LTEQTVSVGS TTVNQVNNTW ADNPQHTISG VYHNIQTRSL QQSWDLQSTP LSTQEVQISA
SDVDSSGNIK KQTQKLTDYI KGQANTYTST TETSFAVDTS NWWLNKFNEI RTSHDTVQRA
WGDDPVGTND KAQWQLQTVN TWDDVHKLPT QVTYTASNTS CNRVEQTGLN SYGLPLWTKS
TGQSSACTAI TARQNNFTYT KDGKTQVDDG YLPYKVTNAK GYITTTEYDM GLGLPIKVVA
PNNIVTQTEY DGIGRPVQMQ QTGSPTRYLR YLLANEGNNA PQDNDNVPVV MTRTSGAGMP
ESEQYFDGQG RLLRTATQGF DGGYQYQDKH YDALGRMTRD STPYGNGTAA DYTEFSDFDA
LDRPIRRTIP NGRSGGLESI YTYNGLTTNI NVEGRTMSRT YGSQGWLYET VDAQDGTNRF
AYDGAGRPLV IRDANNRDIK ATYNGFGHKT QVIDPNQGTT VFGYNTLGEL DKQTDANGVV
QTYVLDVLGR ITSKTTTGGS APGQAVFYWD GNINNDAKIE IIGQLGLLTS ETENGVARTY
AYTTALQLAQ TTVTVDGVSR TVKHQYDSFY GRPKALEYPN GLTLKYGYND YGYLEQTSNA
ASGYLYRQIT AMDEAGHITG ASLANRVMSE SRVYYSEGTM SSVEVDGPLG LIHGHYYDGY
DDFMNLTSER NGVTGLVKSY RYDSLNRLEE YQFNNTNPNF TATVNYAYDK VGNFLKKTDY
SANATNAYRY GGNAGCAANS NAGPNAVCQL NKLNGSTVNF QYDKRGNLRV GDGLTMTYNA
MDKPLTISGR GPNNNTLTAF VYGSDSMRAK QSRTVSGSAT TTYYVDKYYE IDNDGSWRAY
LDDIAVLSYT PQRSHLLQFT LRDRLGSATT MADQNGNIVS QRYFDPFGRT TDLGYNHKLD
IQNKNTLLSQ LQDLAVTNKN RRGFTDHEHL NEQQLIHMNG RVYDYNLGRF MSVDPFIFDL
SSTQSINPYS YILNNPLAGT DPTGYNPILD NRAMNFSITA MTSTGTLSDE LVDVIVQAES
SIGNSEAGGA AETGKLIRQA VIAGSFAGLA KIAEKAIDKS SKKSGNKQSS KTKSNGSNSQ
TKAENGKVSE IGKPSSDRAG GNSNIQGPPD MVRGETDGRH EPDGKPGPRV KVTYPDGAEK
DITSERVKEK IVNAHPNARS KDGSVPKNDV KKMENSINKD GSKREPDEFE RELLKNKSIR
KE
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