| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1976 |
|---|
| Symbol | |
|---|
| ID | 5753720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2354654 |
|---|
| End bp | 2355340 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641288258 |
|---|
| Product | replication P family protein |
|---|
| Protein accession | YP_001554407 |
|---|
| Protein GI | 160875091 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00391127 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0441254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCA ATCAAAATGC GAGCATGAAA TCACTGCAGA CCTTAATCCG CCAGCCGCTG
GTTGGGCAGG GCGCGCGGGT GACGCAACCT GAGCCCACGG CGATGGACAT GGCGATTGTG
GACAGCGTGT TTAGCAAGTT GCGGGTGTTG TTTCCGGTGA GTGCGCCGAG GCCTGAGGAC
GAAGCGACCC ACAAAGCCGA GTGGCTTAAA ACCTTGGCGG CGCAGGGGAT TGCGAGCCGC
GAGCAAGTGC AAGCGGGGCT GAATCGCGCT AGACGCGAGC AGGGCGATAG GCAGTTTTGG
CCGACACCGC GTCAGTTTGC GCTTTGGTGC CAACCTACGG CCTGTGATTT GGGATTGCCC
AAGTTGGAAG CCGCGTTTAA GGAGGCAACG CGCCATTACC ATCACCCTGA CAAGCATACG
TGGAGCCATG ATGTGGTGCG CTTAGCGGTG CGCGAAACGG GCAGCTGGAT GTTTGCTACT
GGGCTTGAAA AGGACGTGTT AATGACCTTT GAGCGCAATT ACACAGTGTT ATGCAGACGC
TTTAGCCGTG GCGAGTTGAC CGATGTGGAA TTGCCAAAGG CACTACCTGA AACGGTAACG
CGGCCGACTG AGGCAGCCAA GGCGAAATCA ATTATTGCCA ATTTACGAAC CAACCTTGGG
CTTAAGGGGG CAAATGATGG CGAATAA
|
|---|
| Protein sequence | MTANQNASMK SLQTLIRQPL VGQGARVTQP EPTAMDMAIV DSVFSKLRVL FPVSAPRPED
EATHKAEWLK TLAAQGIASR EQVQAGLNRA RREQGDRQFW PTPRQFALWC QPTACDLGLP
KLEAAFKEAT RHYHHPDKHT WSHDVVRLAV RETGSWMFAT GLEKDVLMTF ERNYTVLCRR
FSRGELTDVE LPKALPETVT RPTEAAKAKS IIANLRTNLG LKGANDGE
|
|---|
| |