| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1951 |
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| Symbol | |
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| ID | 5753694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2331115 |
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| End bp | 2332659 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641288232 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001554382 |
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| Protein GI | 160875066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00384337 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.587051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTA ACCATGAAAT GTCTGTCAAT TCTGTGATTA AGCAAGCCGA CTTTATTGAA
AGTGTGGCGG ATGCTTTGCA ATACATCTCT TATTACCATC CGAAGGATTT TGTTGATGCC
ATGAGCCAAG CTTATGAGCG TGAACAAAGT GCTGCGGCGA AGGATGCCAT TGCCCAGATC
TTAATTAACT CGCGTATGTC GGCCGAAGGT AAGCGTCCTC TGTGTCAAGA CACTGGGATT
GTCACCACCT TCGTTAAAGT GGGTATGGGT GTCCAATGGG ACAAAACCGA TATGACAATT
CAGGAAATGG TCGACGAAGG TGTTCGTCGT GCCTATACCA ATCCTGATAA CCCACTGCGT
GCATCAATCG TGTCAGATCC TGCGGGCAGC CGTAAAAATA CCAAAGATAA CACCCCATCT
GTGGTGCATA TCGACATGGT GCCAGGCAAC CACATCGAAG TGGCGATTGC GGCCAAAGGC
GGTGGCAGTG AAAACAAAGC TAAGATGGTG ATGTTAAACC CATCTGACGA TATCGCCGCT
TGGGTAGAAA AAACGCTACC GACTATGGGC GCGGGCTGGT GTCCACCGGG TATGCTGGGT
ATCGGCATTG GCGGCACGGC AGAAAAAGCC GCCGTATTAG CCAAAGAAGC GCTGATGGAA
AGCGTGGATA TCCATGAGTT GATGGCCCGT GGCGCGCAAA CGACCGAAGA AAAGCTGCGT
TTAGATATTT TTGAGCGCGC GAACAACTTA GGTATAGGTG CCCAAGGTCT CGGCGGTTTA
ACCACAGTGT TAGACGTTAA AATCAAATCG GCGCCAACCC ATGCGGCTTC AAAGCCTGTG
GTGATGATCC CCAACTGTGC TGCTACTCGC CACGTACATT TCCATTTAGA CGGCTCAGGT
CCTGCTGAAT TAACGCCGCC ATCATTGTCA GATTGGCCAG AAATCACCCG TGAAGTGGGT
GATGATGTGC GCCGTGTTAA CTTAGATACT GTGACTCAAG CGGATATCGA GCAGTGGCAG
AGCGGTGAAA CTATTCTGCT GAGCGGTAAA ATGCTCACAG GTCGCGATGC TGCCCATAAG
CGCATTCAAA GCCTGATTGA AAGTGGTGAA GGTCTGCCAG AAGGCGTGGA CTTTACTGGT
AAATTTATTT ACTACGTTGG CCCCGTTGAT CCAGTGGGTA CTGAAGTTGT CGGTCCTGCG
GGCCCAACAA CGGCAACCCG TATGGATAAA TTCACTGACC TAATGTTAGA AAAAACAGGC
TTGATGGGTA TGATAGGTAA AGCTGAGCGC GGCCCTGCGA CAGTTGAATC GATCAAAAAA
CACAAAGCGG TATATCTGAT GGCCGTTGGC GGCGCTGCGT ATTTAGTGTC AAAAGCGATT
AAACATTCTC GCGTCGTGGC CTTTGCCGAT TTAGGCATGG AAGCGATTTA CGAGTTTGAC
GTGCAAGATA TGCCAGTGAC TGTGGCTGTG GATTCAAACG GCGTGAACGC CCATGAAACT
GGCCCTGCAA TTTGGAAAGT GAATATCGCC AACGCGAAAG CCTAA
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| Protein sequence | MSSNHEMSVN SVIKQADFIE SVADALQYIS YYHPKDFVDA MSQAYEREQS AAAKDAIAQI
LINSRMSAEG KRPLCQDTGI VTTFVKVGMG VQWDKTDMTI QEMVDEGVRR AYTNPDNPLR
ASIVSDPAGS RKNTKDNTPS VVHIDMVPGN HIEVAIAAKG GGSENKAKMV MLNPSDDIAA
WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELMAR GAQTTEEKLR
LDIFERANNL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGSG
PAELTPPSLS DWPEITREVG DDVRRVNLDT VTQADIEQWQ SGETILLSGK MLTGRDAAHK
RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGTEVVGPA GPTTATRMDK FTDLMLEKTG
LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KHSRVVAFAD LGMEAIYEFD
VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NAKA
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