| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1940 |
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| Symbol | |
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| ID | 5753683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2317617 |
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| End bp | 2321498 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641288221 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001554371 |
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| Protein GI | 160875055 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.359117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATTTGA ACTCAGACAA ACATCCGCTA TCGAACGCCT TTCTTAATCT TTGTTATCAG
GCTGATGCGT CTAGGATCCG TCGTCGTTTA TTTAAGCTCA ATAAAGAAGC CGACTCAGAT
AAAAAGACCC AAATCTTAGC CCAGCTGAGT GAGCAAGCGC AGGCGGCGTT TGAGAAGGTT
GAGCAGCGCC GTAACGCTCG CCCTAAAATC CAATATCCTG AAAACCTTCC CGTTTCTTTG
ATGCGCGATG ACATTGCACG CGCGATTGCG GGCAATCAAG TGGTGATCAT TGCCGGTGAA
ACGGGCTCAG GTAAAACCAC GCAGCTCCCC AAAATTTGTT TAGAACTCGG CTTAGGTTGC
CGTGGCATGA TAGGCCACAC CCAGCCAAGA CGCTTAGCTG CCCGCAGCGT GGCGAGCCGA
GTTGCTGAAG AATTACAAAG TCCGCTCGGT GAAGTGGTCG GCTTTAAAGT GCGGTTTGCC
GATGCACTTA AGAGTGACTC TTATATTAAG TTGATGACCG ACGGTATTTT ACTGGCGGAA
TTGACCTCAG ATCGCAATCT CGATCAATAC GATACCATCA TCATAGATGA GGCCCACGAG
CGCAGCCTGA ATATCGATTT TATTCTGGGC TACCTTAAAC AGATCCTTAA AAGACGCCCC
GATCTCAAAG TCATCATCAC GTCGGCGACC ATAGACGTGG AGCGTTTTTC TAAGCATTTC
AACAATGCGC CGATTATCGA AGTGTCGGGC CGTACCTTTC CGGTCGAAAC CCGTTATCGA
CCCTTAGTGC AAGATAGCGA TGCCGATTTA GATCAAATCG AAGGCATTTT TGCCGCCGTC
GATGAGCTGG TGGCCGAAGG GCTGGGCGAC ATTCTGATCT TTATGAACGG CGAGCGGGAA
ATTCGCGATA CGGCCGAACA ATTAAGTCGG CGTAATTACC GCGATACCGA AATTTTGCCG
CTGTACGCTC GTTTATCCTA TGGCGAGCAA TCCAAAGTCT TCAGCAGTCA CAGGGGCAGG
CGGATTGTAT TAGCGACGAA CGTGGCGGAA ACTTCGTTGA CTGTGCCGGG TATTCGCTAC
GTTATCGACC CAGGTACGGC GCGTATCAGC CGCTATAGCT ATCGCACTAA GGTGCAACGC
TTACCAATTG AACCTATCTC GCAGGCAAGC GCTAATCAGC GTCAAGGCCG TTGTGGTCGT
GTGGGACCGG GTATTTGTAT TCGTTTGTAC GATGAGGCGG ATTTTAATAA TCGTCCGGCG
TTTACCGATC CTGAAATTTT GCGCACTAAC TTGGCCTCGG TCATTTTACA GATGCTCGCC
ATCGGTTTGG GTGATATCGG CGGCTTCCCA TTTATCGAGC CACCCGATCC ACGCCATATC
CGCGACGGTT TCTTGCTGCT CGAAGAATTA CAAGCGGTTG AGAGCAAACA CGGCAAGCTA
GTATTGACGC CACTTGGGCG CAACTTGGCG CAAATTCCTG TGGATCCGCG TTTGGCGCGT
ATGGTGGTCG AGAGTCAGCA GTTAGGTTGT TTGAACGAAG TGCTAGTGAT TGCTGCGGGC
TTATCGATTC AAGATCCCCG CGAACGCCCG ATGGAGAAGA AGCAAGCCAG TGATGAAGCC
CATCGTCGTT TTGCCGATCC CAGTTCCGAT TTCGTCAGTT GGATTAACCT GTGGCAGCAC
TTAAAAGATC AGCAAAAAGA GTTATCTGCT AGTCAGTTCC GTAAAAAATG CCGCGATGAG
TATTTAGCTT ATTTGCGCGT TCGCGAGTGG CAGGATTTAT ACGCCCAGCT TAAACAAGCC
GTACACGATT TAAAATGGCG CTTAAACGAT ACGCCCCCAA GTTACGATAC CTTGCACCGT
GCGCTGTTGT CGGGCTTGTT GAGCCATGTT GGTTTTAAAG ATAACAATAA CGAGTATTTA
GGTGCTCGTA ATCGTAAATT CTTTGTGTTT CCCGGTTCGC CATTGGCCAA AAAAGGCCCT
AAGTGGATCA TGGCCGCTGA GCTTACCGAA ACTTCGCGCT TATTCGCTCG CTGCTGCGCT
AAAATCGAAC CCGAATGGCT AGAGCCCTTA GCGGCGCATT TGATTAAGAA AAGCTATGTA
GAGCCCCATT TTGAGGCAAA ACCTGGCAGC GTTATCGCCC TTGAGAATCA AGTGCTTTAT
GGTTTGACGG TCGTGCACCG CCGCAAAGTG CAATACGGCC CCATCGATCC TGTTGAAGCG
CGTGAGATTT TTATCCGCAG CGCCTTGGCA GAAGGGCAGT TGCAAACCCA AGAAGCGTTT
TTTGTCGCTA ACCAAAAACT GCTCGAAGAC ATTGAATCAC TTGAGCATAA ATCCCGTCGC
CGCGATATTT TGGTGGATGA GCAAGTGTTG GTGGATTTTT ACGAACCGCG GATCCCTGAA
GGGATTTACA ACGCCCAGCT GTTTTTTGGC TGGTGGAAGA AGGCCAAGCG CGAGCAACCG
GATTTACTCG ATTTCAGCAA AGCGCTGTTA ATGCAGCGCA ATGCCGACCA TATTTCGACC
TTGGATTTCC CCGATACGTG GCACAAGGGC AATTTGCGCC TGCAGCTAAG TTATCACTTT
GAACCCGCGG CGGCGGATGA TGGTGTGTCG GTGCACATTC CGGTGGCGCT ACTTAATCAA
ATCGACGATA GCGATTTTGA TTGGCTAGTG GCAGGGCTAA GGGAAGAAAA GTGCATCGCA
CTGATCAAAT CTCTGCCTAA GAGTTTACGA CGCAACTTTG TGCCCGCGCC TGACTATGCC
CGCGCTTGTG TGCAGGCCAT GGTGCCTTTT AGTGCCAGTT TGCTTGAGGC CATGTGCAAG
CAATTGCTGC GCATGAGTGG CACGCGTATA TCGCCGGAAG ATTTTGATTT AACGCAACTG
CCTGCGCATT TGCAGATGAA CTTTAAAATC GAAGATGATA AACACAACTT AGTGGCCGAA
GGTCGGGTGC TCGATACCTT AAAAGCCGAG TTGCAGGGCG TGGTGGCTAA GGCCATTCGT
CAGGTGGCGG ATAAGGGCAT AGAGAGAGAA GCGTTAACTG AGTGGTCCTT TGGCGATTTG
CCGCAGCAGT ATCAGCAGCA AAAAGGCAAT TACCAAGTAC GGGCGTTTCC GGCGCTGATC
GATAAAAAAG ACAGTGTTGC GATCAAATTA TTTGATGATG AATTTGAAGC CTTAGATGCT
CATCGCCAAG GTCTGCGACG CTTATTGCTG TTAAACATTC CATCACCGGT AAAACATTTG
CAGCAAGCTT TGCCGAATAA GGCGAAATTG GCGATGTATT TCAATCCCTT TGGTCAAGTG
CAAATCTTGA TTGATGACAT TATTGCCGCC GCTGTGCAGC AATTGTTGGA TGAAAAAGCC
CTCGATGTGC GTAATCAAGC CCAATTTGAG CAGGCAAAGG ACTGGGTTCG CCAAGAACTC
AACCCGACCG CCGAGCAAAT TGCCCTGAAG GTTGAGCAGA TTTTGACCTT ATACCAGAGC
ATTAAAAAGC GTCTCAAGGG CAAAATTAGC TTAGATATCG CTTTTGCTAT GAGTGATATT
CAAAGCCAAT TAGACAAATT AGTGTTTAAA GGGTTTGTTG AATCCTGCGG TTGGAATCGT
TTAGCCGATG TGGCGCGTTA CTTAAAAGCG ATTGAAATCC GTGTCGAGAA GTTACCTGTC
GATCCAACTC GCGACCGTTT GCATATGCAG AGTATTAACA AGGTGCAGGA AGCATTGAAC
GCCCAACTGG CGAAAGTGCC ACGATCGCAG CCGACACCGC CCGCGTTAAT TGAAGCGCGC
TGGATGATTG AAGAGTATCG CGTCTCCTGT TTTGCGCAGG TGTTAGGCAC TGCTTATCCG
ATATCGGAAA AACGCATTTT GAATCATATC CAACAAGTAT AA
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| Protein sequence | MDLNSDKHPL SNAFLNLCYQ ADASRIRRRL FKLNKEADSD KKTQILAQLS EQAQAAFEKV
EQRRNARPKI QYPENLPVSL MRDDIARAIA GNQVVIIAGE TGSGKTTQLP KICLELGLGC
RGMIGHTQPR RLAARSVASR VAEELQSPLG EVVGFKVRFA DALKSDSYIK LMTDGILLAE
LTSDRNLDQY DTIIIDEAHE RSLNIDFILG YLKQILKRRP DLKVIITSAT IDVERFSKHF
NNAPIIEVSG RTFPVETRYR PLVQDSDADL DQIEGIFAAV DELVAEGLGD ILIFMNGERE
IRDTAEQLSR RNYRDTEILP LYARLSYGEQ SKVFSSHRGR RIVLATNVAE TSLTVPGIRY
VIDPGTARIS RYSYRTKVQR LPIEPISQAS ANQRQGRCGR VGPGICIRLY DEADFNNRPA
FTDPEILRTN LASVILQMLA IGLGDIGGFP FIEPPDPRHI RDGFLLLEEL QAVESKHGKL
VLTPLGRNLA QIPVDPRLAR MVVESQQLGC LNEVLVIAAG LSIQDPRERP MEKKQASDEA
HRRFADPSSD FVSWINLWQH LKDQQKELSA SQFRKKCRDE YLAYLRVREW QDLYAQLKQA
VHDLKWRLND TPPSYDTLHR ALLSGLLSHV GFKDNNNEYL GARNRKFFVF PGSPLAKKGP
KWIMAAELTE TSRLFARCCA KIEPEWLEPL AAHLIKKSYV EPHFEAKPGS VIALENQVLY
GLTVVHRRKV QYGPIDPVEA REIFIRSALA EGQLQTQEAF FVANQKLLED IESLEHKSRR
RDILVDEQVL VDFYEPRIPE GIYNAQLFFG WWKKAKREQP DLLDFSKALL MQRNADHIST
LDFPDTWHKG NLRLQLSYHF EPAAADDGVS VHIPVALLNQ IDDSDFDWLV AGLREEKCIA
LIKSLPKSLR RNFVPAPDYA RACVQAMVPF SASLLEAMCK QLLRMSGTRI SPEDFDLTQL
PAHLQMNFKI EDDKHNLVAE GRVLDTLKAE LQGVVAKAIR QVADKGIERE ALTEWSFGDL
PQQYQQQKGN YQVRAFPALI DKKDSVAIKL FDDEFEALDA HRQGLRRLLL LNIPSPVKHL
QQALPNKAKL AMYFNPFGQV QILIDDIIAA AVQQLLDEKA LDVRNQAQFE QAKDWVRQEL
NPTAEQIALK VEQILTLYQS IKKRLKGKIS LDIAFAMSDI QSQLDKLVFK GFVESCGWNR
LADVARYLKA IEIRVEKLPV DPTRDRLHMQ SINKVQEALN AQLAKVPRSQ PTPPALIEAR
WMIEEYRVSC FAQVLGTAYP ISEKRILNHI QQV
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