Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1936 |
Symbol | |
ID | 5753679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2312288 |
End bp | 2314141 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641288217 |
Product | surface antigen (D15) |
Protein accession | YP_001554367 |
Protein GI | 160875051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.538993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCCAT TTTTGCAAAT CACCTCACAT TACTTTCGTT TTTGCTTATT TCTGAGTCTG ATTTCAGTCA CATCCGTCGC TGCGGCGGCA GATGAATTTA TTAAATTATC TGTCACAGGC GTGAATGAAG CTCTGCAACG TAACATAGTT GCGCACTTAG GCACCTTACC CGAATCCGAG GTGCAGCGCC GTGCCTTTCT GTTTAATGTC GATGACAATG TCAGCACAGC CTTAGAATCC ATGGGTTACT ATCATGGCGA AGTGGAAGAA AAACTGACGG AACATGACAA GGGACCGTGG GAACTAAAAC TGGTGATCAC TGCCGGCGAG CCAACCATAG TGCAGTGGGT CGATATTAAC TTCAGTGGCG AAATGCTCGA TGATCGCGCT TTCGATCAAT GGCTGGCAAA GGTCAACCTT AAGCCTGGCG ATGTGCTCAA CCACGGTGTG TATAGCGACG TAAAATCGCA ACTGGTCACC TTAGCTCTGG CCCGAGGTTA CTTCGATGGC GAATTTACGG AATCACAGAT TAAAGTTAAC CGCGACATCA ATACCGCGCA GGTAAGTTTG CATTTTGACT CTGGCAAACG TTATAAATTT GGCCAAGTCA GCTTCGAAGG CCATACTTTA GAACCTGAAA TTTTAGAAAA TCTTATCCCC TTTAAAGAAG GCGCCTCCTA CTCGACTCGC CGTGTGGGCG CGCTGAATCG CCAGTTATTA GACACGGGCT ATTTCGCCAA TATCAAAGTG ATCCCGCAAA TCGACGGTGT CGAAGAGAGT CATATTCCTG TGCTGGTGGA ATTAACTCCT AAGGCAAGCC ACGCCATTGA GCTCGGTTTT GGTGGTGATA TTGGTAAGAC GGATCAAGCT TTCGACCCAA GAGTGCGCGT GACCTGGCGG ACGCCACAAA TCAATAAATA CGGTCACTCA CAGGAAACCA GCCTTGAATG GTCACCGGAT AGACCAAAGT TATTAACCAC TTATACTATC CCCTTGACGC ATCCCTTAGA TGATCAATTA AAAATCCGCG TCGGTTTGCT ACGGGACAAA TACGGTGTGA CCCAAGTGTA TGACGCCGAG AATCGCGATT TTAGTAATAC AGGTCAGCTT GAATCGACCA AATATCTTCT TGGGCTATTA CGCCAACAAA GACTCGAAAA CCAATGGCTA ATGAGTTATT CACTTGAAGC TATTCGCGAA GAATATACCC AGTCTGACGT CGATTATATG CCGTCGTTTT ATTTGGCTGG GATTAACTTT TCGCGAACAA CGCGCGGTGA TAATTCTCTC GATCCTAAGT CCGGTTTTAG GCAGATTTAC AGCCTAGACT ATGCCGATCC CTATTTGGGC TCAGAAACCC GCTTAGCGCG CCTCCAAGCT AAATTTAAAT GGATTGATAC CTTCTTCGAC AACCACAGGA TCGTTGCACG TATCGATTTA GCCGCCAACT TAGCCAACGA AAATGATCTA GCCTCTATTC CGCCTTCACT GCGCTATTTT GCCGGTGGCG ATCAGAGTGT GCGGGGTTAT GGTTATCAAG AATTGGGCCC CTATTTAGAT TATGTCGCCG ATGATGGCAA GACCAATCGC GAGGTCATAG GTGGCCGCTA TTTAATGGTC GGCAGTTTAG AATATCAATA TTATGTGACC CCCACTTGGC GGGTCGGTAC CTTTATCGAT GCGGGTAACG CCTTCGATAA TAATCAATTT GAACCTGTTG TCTCAGTCGG TGGCGGTATC CATTGGATTT CCCCCATTGG CCCAATCAAA CTGGATTTAG GGGTTGGATT GAAAGAAACC GATACCATTG AAAGATCATG GCGAATTCAC CTGACCATGG GGACAGATCT ATGA
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Protein sequence | MQPFLQITSH YFRFCLFLSL ISVTSVAAAA DEFIKLSVTG VNEALQRNIV AHLGTLPESE VQRRAFLFNV DDNVSTALES MGYYHGEVEE KLTEHDKGPW ELKLVITAGE PTIVQWVDIN FSGEMLDDRA FDQWLAKVNL KPGDVLNHGV YSDVKSQLVT LALARGYFDG EFTESQIKVN RDINTAQVSL HFDSGKRYKF GQVSFEGHTL EPEILENLIP FKEGASYSTR RVGALNRQLL DTGYFANIKV IPQIDGVEES HIPVLVELTP KASHAIELGF GGDIGKTDQA FDPRVRVTWR TPQINKYGHS QETSLEWSPD RPKLLTTYTI PLTHPLDDQL KIRVGLLRDK YGVTQVYDAE NRDFSNTGQL ESTKYLLGLL RQQRLENQWL MSYSLEAIRE EYTQSDVDYM PSFYLAGINF SRTTRGDNSL DPKSGFRQIY SLDYADPYLG SETRLARLQA KFKWIDTFFD NHRIVARIDL AANLANENDL ASIPPSLRYF AGGDQSVRGY GYQELGPYLD YVADDGKTNR EVIGGRYLMV GSLEYQYYVT PTWRVGTFID AGNAFDNNQF EPVVSVGGGI HWISPIGPIK LDLGVGLKET DTIERSWRIH LTMGTDL
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